Os03g0415500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
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Os03g0415500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 326.3 | 0.849 | 3.45 | -0.446 | 0.686 | 6.57 | 0.185 | -21.7 | -0.0655 | 20.9 | 1 | 2 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 332.59 | 0.855 | 3.4 | -0.317 | 0.668 | -- | 0.0855 | -- | -0.0813 | 21.1 | -- | -- | -- | -- |
| 332.61 | 0.854 | 3.4 | -0.32 | 0.668 | -- | -- | -- | -0.0814 | 21.1 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 358.29 | 0.884 | 3.38 | -0.318 | -- | -- | -- | -- | -0.0853 | -- | -- | -- | -- | -- |
| 335.3 | 0.857 | 3.39 | -- | 0.668 | -- | -- | -- | -0.0458 | 21 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 360.97 | 0.887 | 3.37 | -- | -- | -- | -- | -- | -0.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 312.52 | wind | 1.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 2 | 312.52 | wind | 1.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 19 | 320.58 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 2 |
| 20 | 320.72 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 2 |
| 36 | 321.89 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 39 | 321.96 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 20 |
| 60 | 322.71 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 64 | 322.84 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 69 | 322.97 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 73 | 323.22 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 14 |
| 82 | 323.34 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 24 | 2 |
| 83 | 323.38 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 88 | 323.44 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 95 | 323.44 | temperature | 30.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 109 | 323.51 | humidity | 80.0 | 90 | > th | dose independent | rect. | 16 | 2 |
| 115 | 323.54 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 123 | 323.58 | wind | 3.0 | 10 | > th | dose independent | rect. | 23 | 8 |
| 125 | 323.69 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 21 | 5 |
| 131 | 323.75 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 135 | 323.78 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 17 | 13 |
| 137 | 323.79 | wind | 3.0 | 10 | > th | dose independent | rect. | 19 | 12 |
| 142 | 323.88 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 143 | 323.88 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 11 |
| 146 | 323.89 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 9 |
| 149 | 323.90 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 159 | 323.95 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 10 | NA |
| 161 | 323.97 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 9 |
| 163 | 323.98 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 170 | 323.98 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 175 | 323.99 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 176 | 323.99 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 5 | 9 |
| 180 | 323.99 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 186 | 324.02 | precipitation | 0.1 | 90 | > th | dose independent | sin | 11 | NA |
| 187 | 324.02 | humidity | 80.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 194 | 324.03 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 195 | 324.03 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 21 | 2 |
| 202 | 324.04 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 5 |
| 205 | 324.07 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 212 | 324.11 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 21 | 2 |
| 273 | 324.20 | wind | 3.0 | 90 | > th | dose dependent | rect. | 23 | 7 |
| 274 | 324.21 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 276 | 324.22 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 326 | 324.31 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 18 | 1 |
| 327 | 324.31 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 21 | 10 |
| 337 | 324.34 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 18 | 1 |
| 380 | 324.50 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 407 | 324.58 | wind | 1.0 | 30 | > th | dose dependent | rect. | 18 | 12 |
| 440 | 324.79 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 453 | 324.83 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 484 | 324.94 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 488 | 324.98 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 5 |
| 499 | 325.06 | wind | 7.0 | 720 | < th | dose independent | rect. | 18 | 14 |
| 516 | 325.14 | wind | 5.0 | 270 | > th | dose independent | rect. | 19 | 11 |
| 517 | 325.14 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 21 |
| 541 | 325.23 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 556 | 325.28 | wind | 9.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 557 | 325.28 | wind | 9.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 561 | 325.30 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 570 | 325.30 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 21 | 1 |
| 581 | 325.31 | wind | 7.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 584 | 325.31 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 17 | 9 |
| 585 | 325.32 | wind | 5.0 | 720 | > th | dose independent | rect. | 19 | 5 |
| 604 | 325.36 | wind | 5.0 | 720 | > th | dose independent | rect. | 18 | 7 |
| 605 | 325.36 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 2 |
| 609 | 325.37 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 610 | 325.37 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 612 | 325.38 | wind | 3.0 | 720 | > th | dose independent | rect. | 23 | 3 |
| 616 | 325.39 | wind | 1.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 627 | 325.42 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 646 | 325.45 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 21 | 3 |
| 654 | 325.46 | wind | 3.0 | 30 | > th | dose independent | sin | 9 | NA |
| 676 | 325.52 | wind | 1.0 | 30 | < th | dose independent | rect. | 21 | 1 |
| 682 | 325.53 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 693 | 325.55 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 728 | 325.63 | wind | 1.0 | 720 | > th | dose dependent | rect. | 23 | 2 |
| 729 | 325.63 | wind | 7.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 749 | 325.66 | radiation | 1.0 | 90 | < th | dose independent | rect. | 12 | 7 |
| 750 | 325.66 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 21 | 8 |
| 751 | 325.66 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 9 |
| 752 | 325.66 | temperature | 30.0 | 10 | < th | dose independent | rect. | 16 | 14 |
| 781 | 325.73 | wind | 5.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 782 | 325.74 | wind | 5.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 790 | 325.76 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 23 | 22 |
| 824 | 325.83 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 19 | 11 |
| 827 | 325.84 | wind | 5.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 832 | 325.85 | wind | 7.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 858 | 325.88 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 6 |
| 865 | 325.89 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 894 | 325.93 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 895 | 325.93 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 907 | 325.95 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 925 | 325.98 | wind | 3.0 | 10 | > th | dose independent | rect. | 19 | 15 |
| 951 | 326.02 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 963 | 326.04 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 981 | 326.06 | humidity | 70.0 | 30 | > th | dose independent | rect. | 21 | 15 |
| 983 | 326.06 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 988 | 326.07 | humidity | 90.0 | 270 | > th | dose independent | rect. | 14 | 1 |
| 989 | 326.07 | wind | 5.0 | 90 | < th | dose independent | rect. | 20 | 11 |
| 990 | 326.07 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 1 |
| 993 | 326.08 | precipitation | 0.1 | 30 | > th | dose independent | sin | 0 | NA |