FiT-DB / Search/ Help/ Sample detail

Os03g0410700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0168) R2 : 0.755
β1 : -1.15 (0.0616) R2dD : 0.195 R2D : 0.0761
β2 : 1.25 (0.0405) R2dC : 0.511 R2C : 0.467
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.519 (0.0359) R2dN8 : 0.15 R2N8 : 0.0558
σ : 0.316
deviance : 45.61
__
_____
C
peak time of C : 22.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.45 0.303 11.8 -1.23 1.25 -0.399 -0.177 0.0584 -0.494 22.4 1000 87 -- --
41.45 0.3 11.8 -1.23 1.25 -0.389 -0.177 -- -0.494 22.4 1000 86 -- --
41.58 0.3 11.8 -1.22 1.25 -0.4 -- 0.0523 -0.493 22.4 1000 86 -- --
41.58 0.3 11.8 -1.22 1.25 -0.39 -- -- -0.493 22.4 1000 86 -- --
135.72 0.543 11.8 -1.27 -- -0.523 -- 0.849 -0.5 -- 1001 452 -- --
45.46 0.316 11.9 -1.16 1.24 -- -0.194 -- -0.519 22.4 -- -- -- --
45.61 0.316 11.9 -1.15 1.25 -- -- -- -0.519 22.4 -- -- -- --
135.56 0.542 11.8 -1.16 -- -0.37 -- -- -0.466 -- 1003 748 -- --
78.49 0.413 11.8 -- 1.23 -0.214 -- -- -0.363 22.3 1002 133 -- --
140.33 0.554 11.8 -1.13 -- -- -- -- -0.515 -- -- -- -- --
80.54 0.42 11.8 -- 1.24 -- -- -- -0.391 22.3 -- -- -- --
164.49 0.597 11.8 -- -- -0.379 -- -- -0.248 -- 1008 315 -- --
174.07 0.616 11.8 -- -- -- -- -- -0.389 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.55 wind 1 43200 < th dose independent rect. 5 20
4 39.69 wind 1 43200 > th dose independent rect. 5 19
6 39.78 wind 1 43200 < th dose dependent rect. 6 18
7 39.80 wind 1 43200 > th dose independent rect. 13 14
14 40.01 atmosphere 1000 90 > th dose independent rect. 19 23
21 40.11 humidity 70 43200 > th dose dependent rect. 21 1
23 40.16 wind 1 43200 > th dose independent rect. 13 10
25 40.16 atmosphere 1000 90 > th dose independent rect. 5 21
27 40.23 wind 9 43200 > th dose dependent rect. 17 16
28 40.25 wind 1 43200 > th dose independent sin 16 NA
47 40.37 wind 1 43200 < th dose independent rect. 13 14
51 40.40 wind 7 14400 > th dose independent rect. 8 1
53 40.40 humidity 70 43200 > th dose dependent rect. 18 6
56 40.41 humidity 70 43200 > th dose dependent rect. 17 8
58 40.42 wind 7 14400 < th dose independent rect. 8 1
63 40.46 wind 1 43200 > th dose independent rect. 14 8
73 40.52 radiation 20 4320 < th dose independent rect. 3 4
75 40.52 atmosphere 1000 10 > th dose independent rect. 6 20
84 40.55 radiation 20 4320 < th dose independent rect. 1 6
86 40.55 humidity 70 43200 > th dose dependent rect. 17 13
92 40.57 wind 7 14400 > th dose independent rect. 21 1
99 40.58 wind 1 43200 < th dose independent sin 17 NA
100 40.58 wind 7 14400 < th dose independent rect. 21 1
104 40.58 wind 3 43200 < th dose dependent rect. 16 5
112 40.60 wind 7 14400 > th dose dependent rect. 21 1
118 40.62 wind 1 43200 < th dose dependent sin 21 NA
119 40.62 humidity 70 43200 > th dose dependent sin 14 NA
139 40.67 wind 1 43200 < th dose independent rect. 13 10
145 40.68 wind 9 43200 > th dose dependent sin 11 NA
147 40.69 radiation 20 4320 < th dose independent rect. 18 13
159 40.71 humidity 80 43200 > th dose independent rect. 11 19
166 40.72 wind 1 43200 < th dose dependent rect. 7 12
178 40.75 wind 1 43200 > th dose independent rect. 8 2
183 40.76 wind 9 43200 > th dose independent rect. 17 17
191 40.77 humidity 80 43200 < th dose dependent rect. 7 1
202 40.79 wind 1 43200 > th dose independent rect. 12 17
203 40.79 humidity 80 43200 < th dose independent rect. 11 19
230 40.83 wind 1 43200 < th dose independent rect. 7 4
241 40.84 wind 1 43200 > th dose independent rect. 9 23
246 40.85 wind 1 43200 < th dose independent rect. 8 2
251 40.85 wind 9 43200 < th dose independent rect. 18 16
266 40.87 wind 1 14400 < th dose independent rect. 10 16
273 40.88 wind 1 43200 > th dose independent rect. 9 21
334 40.93 wind 5 14400 > th dose dependent rect. 20 7
348 40.94 wind 7 14400 > th dose dependent rect. 8 1
398 40.99 wind 3 14400 < th dose dependent rect. 11 8
413 41.00 atmosphere 1000 90 < th dose independent rect. 10 21
415 41.00 wind 1 43200 < th dose dependent rect. 11 10
427 41.01 wind 9 43200 > th dose dependent rect. 20 13
437 41.02 humidity 80 43200 > th dose independent rect. 22 23
441 41.02 wind 3 14400 < th dose dependent rect. 11 6
446 41.03 wind 9 43200 > th dose independent rect. 20 14
456 41.03 wind 5 14400 > th dose dependent rect. 21 4
484 41.05 wind 7 14400 > th dose independent rect. 20 7
501 41.06 humidity 80 43200 > th dose independent sin 16 NA
538 41.08 wind 1 14400 > th dose independent rect. 10 6
540 41.08 wind 7 14400 < th dose independent rect. 20 7
546 41.08 wind 1 43200 < th dose independent rect. 9 23
550 41.08 wind 3 14400 < th dose dependent rect. 13 3
558 41.09 wind 1 14400 < th dose independent rect. 11 1
559 41.09 wind 1 43200 < th dose independent rect. 6 6
570 41.09 wind 3 43200 < th dose dependent rect. 23 1
576 41.10 wind 1 43200 > th dose independent rect. 7 4
580 41.10 wind 1 14400 < th dose independent rect. 10 11
582 41.10 wind 5 14400 > th dose independent rect. 20 15
596 41.11 humidity 80 43200 > th dose independent no NA NA
604 41.11 humidity 80 43200 > th dose independent rect. 2 23
606 41.11 humidity 80 43200 < th dose independent rect. 22 23
609 41.11 wind 3 4320 < th dose dependent rect. 7 1
610 41.11 wind 1 43200 < th dose dependent rect. 7 4
616 41.12 wind 1 14400 > th dose independent rect. 11 1
618 41.12 wind 1 14400 < th dose independent rect. 10 6
635 41.13 wind 1 43200 > th dose independent no NA NA
656 41.13 wind 5 14400 > th dose dependent rect. 20 14
672 41.14 wind 1 43200 > th dose independent rect. 15 23
678 41.14 temperature 30 4320 < th dose dependent rect. 17 2
691 41.15 wind 1 14400 < th dose independent rect. 10 4
699 41.15 wind 9 43200 < th dose independent rect. 20 14
714 41.15 wind 1 43200 < th dose dependent rect. 9 15
720 41.16 wind 1 14400 < th dose independent rect. 15 11
757 41.17 humidity 80 43200 > th dose independent rect. 16 23
785 41.18 temperature 10 4320 > th dose dependent rect. 18 1
787 41.18 radiation 20 4320 > th dose dependent rect. 6 1
813 41.19 wind 3 14400 < th dose independent rect. 15 2
826 41.19 wind 1 43200 > th dose independent rect. 21 23
840 41.20 wind 9 14400 < th dose independent rect. 18 3
906 41.22 atmosphere 1000 10 > th dose independent rect. 6 18
931 41.23 atmosphere 1000 270 > th dose independent rect. 17 22
947 41.24 wind 9 14400 > th dose independent rect. 19 2
977 41.25 humidity 80 43200 < th dose independent sin 16 NA
990 41.25 humidity 80 43200 > th dose independent rect. 1 14