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Os03g0410300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1313 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0183) R2 : 9.82e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00816 (0.0386) R2dN8 : 0.000127 R2N8 : 9.82e-05
σ : 0.345
deviance : 54.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.92 0.293 10.9 0.732 0.28 0.638 -0.533 -1.18 0.218 15.3 24.31 79 -- --
40.43 0.296 11 0.58 0.288 0.802 -0.146 -- 0.175 15.2 23.63 31 -- --
39.58 0.293 10.9 0.671 0.276 0.643 -- -0.868 0.195 15.7 24.1 74 -- --
39.65 0.293 11 0.585 0.259 0.986 -- -- 0.141 15.6 21 114 -- --
42.97 0.305 11 0.581 -- 0.787 -- -0.79 0.143 -- 20.8 109 -- --
48.65 0.327 11 0.388 0.202 -- -0.0774 -- 0.056 16.7 -- -- -- --
48.66 0.327 11 0.387 0.202 -- -- -- 0.0556 16.7 -- -- -- --
43.17 0.306 11 0.559 -- 1.02 -- -- 0.124 -- 20.7 137 -- --
47.56 0.321 11 -- 0.237 0.775 -- -- 0.0573 16.2 20.9 117 -- --
50.83 0.333 11 0.38 -- -- -- -- 0.0503 -- -- -- -- --
52.62 0.339 11 -- 0.195 -- -- -- 0.0124 16.8 -- -- -- --
50.51 0.331 11 -- -- 0.697 -- -- 0.0456 -- 20.8 79 -- --
54.63 0.345 11 -- -- -- -- -- 0.00816 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.37 temperature 15 270 > th dose dependent rect. 19 9
2 36.63 radiation 20 4320 < th dose independent rect. 21 9
5 37.14 temperature 20 90 > th dose independent rect. 9 19
7 37.34 temperature 25 90 < th dose dependent rect. 16 19
12 37.53 temperature 15 90 > th dose dependent rect. 9 19
14 37.72 temperature 20 270 > th dose independent rect. 9 17
17 37.74 temperature 10 270 > th dose dependent rect. 9 17
20 37.86 temperature 20 90 > th dose independent rect. 20 21
37 38.06 temperature 20 90 > th dose independent rect. 20 8
47 38.13 temperature 25 270 < th dose dependent rect. 11 22
60 38.25 temperature 25 10 < th dose dependent rect. 17 19
69 38.31 humidity 90 14400 > th dose dependent rect. 1 9
74 38.33 temperature 10 270 > th dose dependent rect. 6 22
90 38.44 temperature 25 10 < th dose dependent rect. 5 20
111 38.50 temperature 15 90 > th dose dependent rect. 9 22
113 38.51 temperature 25 90 < th dose dependent rect. 4 21
130 38.58 humidity 90 14400 > th dose dependent rect. 5 1
139 38.60 temperature 10 90 > th dose dependent rect. 19 23
168 38.70 temperature 20 90 > th dose independent rect. 20 19
186 38.74 temperature 20 10 > th dose independent rect. 9 22
189 38.74 temperature 10 270 > th dose dependent rect. 17 22
197 38.77 humidity 90 14400 > th dose dependent rect. 4 3
229 38.85 temperature 25 10 < th dose dependent rect. 17 17
261 38.93 temperature 25 10 < th dose dependent rect. 14 22
262 38.94 temperature 15 10 > th dose dependent rect. 9 22
264 38.95 humidity 90 14400 > th dose dependent sin 7 NA
285 38.97 temperature 25 90 < th dose dependent rect. 1 23
292 38.99 temperature 15 10 > th dose dependent rect. 20 22
318 39.05 humidity 70 43200 > th dose independent rect. 22 16
320 39.05 humidity 90 43200 < th dose dependent rect. 23 14
371 39.14 temperature 25 720 < th dose dependent rect. 9 15
381 39.15 temperature 25 90 < th dose dependent no NA NA
386 39.16 humidity 70 43200 > th dose independent sin 6 NA
388 39.16 humidity 90 43200 < th dose dependent sin 6 NA
457 39.25 humidity 70 43200 < th dose independent rect. 21 18
469 39.25 temperature 25 90 < th dose dependent rect. 21 23
491 39.28 temperature 30 720 < th dose dependent sin 17 NA
541 39.32 temperature 25 30 < th dose dependent rect. 23 23
551 39.34 humidity 90 14400 > th dose independent rect. 1 7
606 39.37 temperature 25 30 < th dose dependent rect. 19 23
612 39.38 temperature 25 30 < th dose dependent rect. 7 23
621 39.40 humidity 80 43200 < th dose independent rect. 3 7
644 39.42 humidity 90 14400 > th dose independent rect. 23 9
676 39.44 humidity 60 43200 < th dose independent rect. 8 2
685 39.45 humidity 80 43200 < th dose independent rect. 1 11
690 39.45 temperature 30 720 < th dose dependent rect. 15 10
700 39.46 humidity 80 43200 < th dose independent sin 6 NA
710 39.47 humidity 60 43200 > th dose independent rect. 8 2
738 39.49 humidity 80 43200 > th dose independent rect. 3 7
762 39.50 humidity 90 14400 > th dose dependent rect. 23 4
800 39.53 temperature 15 720 > th dose dependent sin 18 NA
811 39.54 radiation 20 4320 < th dose independent rect. 1 5
815 39.54 humidity 90 43200 < th dose dependent rect. 11 2
840 39.56 humidity 90 43200 < th dose dependent rect. 8 1
858 39.57 temperature 25 270 < th dose dependent sin 12 NA
904 39.61 temperature 30 720 < th dose dependent rect. 16 7
963 39.65 wind 9 1440 < th dose independent rect. 9 1
971 39.65 temperature 15 720 > th dose dependent rect. 16 6
973 39.65 humidity 50 43200 > th dose dependent rect. 2 10
984 39.66 atmosphere 1010 90 < th dose independent rect. 9 19
999 39.67 humidity 50 43200 > th dose independent rect. 10 3