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Os03g0409100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0381) R2 : 0.812
β1 : 0.848 (0.14) R2dD : 0.0158 R2D : -0.000877
β2 : 2.91 (0.109) R2dC : 0.361 R2C : 0.563
β3 : 1.67 (0.086) R2dE : 0.19 R2E : 0.412
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.753 (0.0815) R2dN8 : 0.0474 R2N8 : 0.0292
σ : 0.713
deviance : 234.04
__
_____
C
peak time of C : 19.2
E
wheather : radiation
threshold : 22.07
memory length : 10
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.97
open length of G : 23.1

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
230.39 0.713 11.1 0.85 2.9 1.68 1.16 -0.882 0.748 19.2 21.87 10 5.96 23.1
233.35 0.711 11.1 0.85 2.91 1.68 0.516 -- 0.753 19.2 22.03 10 5.95 23.1
233 0.711 11.1 0.844 2.93 1.68 -- -0.467 0.758 19.2 22.03 10 5.95 23.1
234.04 0.713 11.1 0.848 2.91 1.67 -- -- 0.753 19.2 22.07 10 5.97 23.1
490.68 1.03 11.1 0.866 -- 2.76 -- 0.442 0.639 -- 13.54 6 6.4 21.6
294.82 0.805 11.1 0.763 3.99 -- 0.408 -- 0.815 20.7 -- -- -- --
295.37 0.805 11.1 0.75 3.98 -- -- -- 0.815 20.7 -- -- -- --
482.54 1.02 11 0.934 -- 2.81 -- -- 1.04 -- 20.54 5 7.02 21.2
252.55 0.74 11.1 -- 2.9 1.68 -- -- 0.662 19.2 21.62 9 5.97 23.1
1191.61 1.61 11 0.74 -- -- -- -- 0.781 -- -- -- -- --
310.18 0.824 11.2 -- 3.98 -- -- -- 0.731 20.7 -- -- -- --
482.69 1.02 11 -- -- 2.78 -- -- 0.913 -- 19.89 11 7.1 20.8
1206.06 1.62 11 -- -- -- -- -- 0.699 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 233.49 radiation 20.0 10 < th dose dependent rect. 6 23
4 241.17 radiation 20.0 10 < th dose independent rect. 6 23
5 242.32 radiation 20.0 10 < th dose dependent rect. 23 17
16 245.20 wind 1.0 270 < th dose independent rect. 4 1
22 247.40 radiation 1.0 10 < th dose independent rect. 23 18
35 248.96 radiation 30.0 10 < th dose dependent rect. 23 12
36 249.15 wind 1.0 270 < th dose dependent rect. 4 1
37 249.23 radiation 30.0 10 < th dose dependent sin 7 NA
46 249.90 radiation 1.0 10 > th dose dependent rect. 5 1
62 250.09 radiation 20.0 10 < th dose independent rect. 23 16
82 251.32 radiation 1.0 30 < th dose independent rect. 23 15
85 251.41 temperature 20.0 720 > th dose independent rect. 23 3
89 251.67 temperature 20.0 10 > th dose dependent rect. 5 1
92 251.87 wind 1.0 90 < th dose independent rect. 4 9
96 251.95 wind 1.0 90 < th dose independent rect. 4 17
100 252.12 temperature 20.0 720 > th dose independent rect. 22 6
118 252.32 wind 1.0 90 < th dose independent rect. 4 13
126 252.41 radiation 40.0 10 < th dose dependent rect. 12 17
146 253.33 radiation 1.0 10 < th dose independent rect. 23 13
148 253.34 humidity 50.0 10 > th dose dependent rect. 6 23
150 253.36 radiation 1.0 10 > th dose dependent sin 8 NA
151 253.39 wind 1.0 90 < th dose dependent rect. 4 19
158 253.48 radiation 1.0 10 > th dose independent sin 4 NA
162 253.66 radiation 1.0 10 < th dose independent sin 4 NA
163 253.74 wind 1.0 90 < th dose dependent rect. 4 13
166 253.78 radiation 40.0 10 < th dose independent rect. 12 17
170 253.82 radiation 40.0 90 < th dose independent rect. 13 15
172 253.86 wind 1.0 90 < th dose dependent rect. 4 10
182 254.02 radiation 1.0 30 < th dose independent rect. 23 9
186 254.04 wind 1.0 90 > th dose independent rect. 1 16
192 254.27 temperature 25.0 90 < th dose independent rect. 12 16
194 254.34 radiation 1.0 10 > th dose independent rect. 5 1
231 254.73 wind 1.0 90 < th dose dependent rect. 4 8
232 254.74 wind 1.0 90 < th dose dependent rect. 4 4
235 254.81 radiation 1.0 10 > th dose independent rect. 5 8
276 255.63 temperature 20.0 720 > th dose independent rect. 21 10
286 255.84 radiation 1.0 270 > th dose dependent rect. 5 1
294 256.05 radiation 20.0 10 < th dose dependent rect. 21 23
296 256.09 radiation 20.0 10 < th dose dependent rect. 23 21
299 256.15 radiation 1.0 30 < th dose dependent rect. 23 9
306 256.19 temperature 20.0 720 < th dose independent rect. 24 3
310 256.23 radiation 20.0 10 < th dose independent rect. 12 17
335 256.93 humidity 50.0 10 > th dose dependent rect. 13 16
347 257.08 temperature 20.0 720 < th dose independent rect. 23 7
354 257.24 radiation 10.0 10 < th dose dependent rect. 19 23
363 257.36 wind 1.0 90 > th dose independent rect. 23 18
365 257.43 radiation 1.0 10 < th dose independent rect. 23 7
380 257.63 radiation 1.0 10 < th dose dependent rect. 23 7
395 257.91 wind 3.0 10 < th dose dependent rect. 5 1
398 257.95 temperature 20.0 10 > th dose independent rect. 5 1
411 257.99 radiation 1.0 10 < th dose independent rect. 1 16
416 258.05 radiation 20.0 10 < th dose independent rect. 23 11
428 258.21 radiation 10.0 10 < th dose dependent rect. 1 16
440 258.37 radiation 40.0 10 < th dose independent rect. 6 23
446 258.53 precipitation 0.1 90 < th dose independent rect. 4 9
447 258.53 precipitation 0.1 90 < th dose dependent rect. 4 9
457 258.70 humidity 60.0 10 > th dose dependent rect. 23 6
479 259.00 wind 9.0 90 < th dose independent rect. 13 15
486 259.09 radiation 1.0 10 < th dose independent rect. 23 21
489 259.11 temperature 10.0 90 > th dose independent rect. 4 9
490 259.11 atmosphere 995.0 90 > th dose independent rect. 4 9
491 259.11 atmosphere 1015.0 90 < th dose independent rect. 4 9
492 259.11 temperature 10.0 90 > th dose independent rect. 13 15
493 259.11 humidity 70.0 90 > th dose dependent rect. 23 5
508 259.30 wind 1.0 90 > th dose independent sin 4 NA
510 259.31 precipitation 0.1 10 < th dose independent rect. 5 8
511 259.31 precipitation 0.1 10 < th dose dependent rect. 5 8
516 259.35 radiation 20.0 10 < th dose dependent rect. 23 23
527 259.46 temperature 10.0 10 > th dose dependent rect. 23 6
559 259.78 wind 9.0 10 < th dose independent rect. 13 16
571 259.88 temperature 25.0 90 < th dose independent rect. 4 8
574 259.89 temperature 10.0 10 > th dose independent rect. 5 8
576 259.89 atmosphere 995.0 10 > th dose independent rect. 5 8
577 259.89 atmosphere 1015.0 10 < th dose independent rect. 5 8
578 259.89 atmosphere 995.0 90 > th dose independent rect. 13 15
579 259.89 temperature 10.0 10 > th dose independent rect. 13 16
580 259.90 radiation 20.0 10 < th dose independent rect. 23 21
587 259.98 temperature 20.0 10 > th dose independent rect. 1 4
606 260.16 atmosphere 995.0 10 > th dose independent rect. 13 16
611 260.18 temperature 20.0 90 > th dose independent rect. 23 5
613 260.21 temperature 20.0 10 > th dose independent rect. 23 6
633 260.37 humidity 50.0 10 > th dose dependent rect. 23 19
636 260.40 temperature 30.0 270 < th dose dependent rect. 3 8
650 260.64 precipitation 0.1 90 < th dose independent rect. 13 15
651 260.64 precipitation 0.1 90 < th dose dependent rect. 13 15
671 260.77 atmosphere 1015.0 10 < th dose independent rect. 23 6
697 261.01 precipitation 0.1 10 < th dose independent rect. 5 18
699 261.01 precipitation 0.1 10 < th dose dependent rect. 5 18
701 261.04 wind 9.0 90 < th dose independent rect. 4 9
707 261.12 temperature 20.0 90 > th dose dependent rect. 4 3
723 261.18 radiation 20.0 10 < th dose independent rect. 1 14
732 261.29 wind 9.0 10 < th dose independent rect. 5 8
746 261.43 temperature 20.0 720 > th dose independent sin 11 NA
753 261.51 humidity 80.0 10 > th dose independent rect. 23 17
755 261.54 wind 1.0 90 > th dose independent rect. 23 10
758 261.56 wind 9.0 10 < th dose independent rect. 23 6
759 261.56 temperature 10.0 10 > th dose independent rect. 23 6
760 261.56 temperature 30.0 10 < th dose independent rect. 23 6
761 261.56 humidity 50.0 10 > th dose independent rect. 23 6
764 261.56 atmosphere 995.0 10 > th dose independent rect. 23 6
771 261.56 temperature 10.0 10 > th dose independent rect. 5 18
774 261.56 atmosphere 1015.0 10 < th dose independent rect. 5 18
775 261.56 radiation 20.0 10 < th dose dependent rect. 23 6
794 261.66 radiation 1.0 10 < th dose independent rect. 1 13
798 261.68 wind 1.0 90 < th dose independent sin 4 NA
803 261.71 precipitation 0.1 10 < th dose independent rect. 13 16
807 261.71 precipitation 0.1 10 < th dose dependent rect. 13 16
809 261.72 atmosphere 1015.0 10 < th dose dependent rect. 23 6
842 261.99 humidity 50.0 10 > th dose independent rect. 13 16
845 262.01 radiation 10.0 1440 > th dose dependent rect. 9 1
875 262.25 atmosphere 1015.0 90 < th dose dependent rect. 23 5
876 262.27 humidity 50.0 90 > th dose independent rect. 4 9
879 262.29 wind 7.0 1440 < th dose independent rect. 5 1
881 262.29 temperature 10.0 1440 > th dose independent rect. 5 1
884 262.29 temperature 30.0 1440 < th dose independent rect. 5 1
888 262.29 humidity 50.0 1440 > th dose independent rect. 5 1
897 262.29 atmosphere 995.0 1440 > th dose independent rect. 5 1
898 262.29 atmosphere 1015.0 1440 < th dose independent rect. 5 1
899 262.29 radiation 20.0 1440 < th dose independent rect. 5 1
908 262.29 temperature 10.0 1440 > th dose independent rect. 6 23
915 262.32 radiation 10.0 10 < th dose dependent rect. 6 11
917 262.33 wind 3.0 10 < th dose independent rect. 5 1
922 262.36 atmosphere 1015.0 10 < th dose independent rect. 13 16
925 262.44 radiation 20.0 10 < th dose independent sin 6 NA
932 262.49 humidity 80.0 90 > th dose independent rect. 23 5
955 262.66 atmosphere 1005.0 10 > th dose independent rect. 5 1
962 262.67 humidity 80.0 10 > th dose independent rect. 23 21
963 262.67 atmosphere 1015.0 10 < th dose dependent rect. 13 16
989 262.82 humidity 80.0 1440 < th dose dependent rect. 20 15
991 262.83 wind 9.0 10 < th dose independent rect. 5 18
995 262.85 wind 3.0 270 < th dose dependent rect. 2 9