Os03g0403600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : von Willebrand factor, type A domain containing protein.
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Os03g0403600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : von Willebrand factor, type A domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 215.85 | 0.69 | 6.6 | 0.0428 | 2.13 | -1.33 | -1.16 | -0.779 | -0.83 | 9.83 | 21.4 | 989 | -- | -- |
| 217.31 | 0.687 | 6.58 | 0.233 | 2.13 | -1.28 | -0.949 | -- | -0.786 | 9.81 | 21.39 | 990 | -- | -- |
| 220.39 | 0.691 | 6.59 | 0.0818 | 2.15 | -1.33 | -- | -0.447 | -0.799 | 9.78 | 21.4 | 1004 | -- | -- |
| 220.68 | 0.692 | 6.58 | 0.203 | 2.14 | -1.29 | -- | -- | -0.785 | 9.75 | 21.33 | 1004 | -- | -- |
| 471.28 | 1.01 | 6.61 | 0.26 | -- | -1.89 | -- | -0.375 | -0.656 | -- | 21.32 | 831 | -- | -- |
| 269.75 | 0.77 | 6.65 | -0.259 | 2.31 | -- | -1.05 | -- | -1.14 | 9.95 | -- | -- | -- | -- |
| 273.95 | 0.775 | 6.65 | -0.301 | 2.32 | -- | -- | -- | -1.14 | 9.89 | -- | -- | -- | -- |
| 471.97 | 1.01 | 6.6 | 0.365 | -- | -1.86 | -- | -- | -0.631 | -- | 21.4 | 835 | -- | -- |
| 221.63 | 0.693 | 6.59 | -- | 2.15 | -1.23 | -- | -- | -0.822 | 9.75 | 21.32 | 992 | -- | -- |
| 595.36 | 1.14 | 6.72 | -0.327 | -- | -- | -- | -- | -1.14 | -- | -- | -- | -- | -- |
| 276.34 | 0.778 | 6.65 | -- | 2.32 | -- | -- | -- | -1.11 | 9.9 | -- | -- | -- | -- |
| 475.11 | 1.02 | 6.62 | -- | -- | -1.77 | -- | -- | -0.693 | -- | 21.34 | 830 | -- | -- |
| 598.17 | 1.14 | 6.71 | -- | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 215.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 217.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 4 | 217.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 5 | 217.77 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 19 |
| 6 | 218.19 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 10 | 220.16 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 15 | 220.99 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 20 | 221.73 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 21 | 221.84 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 26 | 222.59 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 19 | 11 |
| 31 | 222.82 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 4 |
| 32 | 222.84 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 47 | 223.46 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 63 | 224.15 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 70 | 224.46 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 87 | 224.79 | temperature | 20.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 89 | 224.79 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 102 | 225.12 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 149 | 226.21 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 153 | 226.23 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 163 | 226.32 | temperature | 20.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 190 | 226.75 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 191 | 226.78 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 192 | 226.78 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 203 | 226.92 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 22 |
| 213 | 227.05 | temperature | 20.0 | 720 | < th | dose independent | rect. | 3 | 19 |
| 229 | 227.20 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 246 | 227.40 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 250 | 227.44 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 274 | 227.69 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 283 | 227.75 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 350 | 228.23 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 361 | 228.30 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 381 | 228.40 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 383 | 228.42 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 398 | 228.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 407 | 228.59 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 491 | 229.10 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 509 | 229.21 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 556 | 229.42 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 567 | 229.47 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 579 | 229.50 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 582 | 229.51 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 624 | 229.72 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 642 | 229.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 650 | 229.85 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 667 | 229.94 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 758 | 230.26 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 775 | 230.31 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 812 | 230.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 814 | 230.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 817 | 230.49 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 830 | 230.55 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 859 | 230.64 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 907 | 230.80 | temperature | 20.0 | 720 | < th | dose independent | no | NA | NA |
| 949 | 230.94 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |