Os03g0390400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome c oxidase subunit 6b.
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Os03g0390400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome c oxidase subunit 6b.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.18 | 0.211 | 12.1 | -0.122 | 0.217 | 0.976 | 0.0863 | -1.82 | -0.0223 | 14.1 | 50.13 | 225 | -- | -- |
| 20.57 | 0.211 | 12.1 | -0.156 | 0.219 | 0.622 | 0.158 | -- | -0.0194 | 13.9 | 50.28 | 351 | -- | -- |
| 20.2 | 0.209 | 12.1 | -0.12 | 0.218 | 0.981 | -- | -1.87 | -0.0223 | 14.2 | 50.15 | 225 | -- | -- |
| 20.51 | 0.211 | 12.1 | -0.179 | 0.214 | 0.501 | -- | -- | -0.0189 | 13.8 | 51.92 | 363 | -- | -- |
| 22.75 | 0.222 | 12.1 | -0.135 | -- | 0.777 | -- | -1.3 | -0.0276 | -- | 51 | 508 | -- | -- |
| 23.03 | 0.225 | 12.1 | -0.22 | 0.188 | -- | 0.134 | -- | -0.000932 | 12.3 | -- | -- | -- | -- |
| 23.1 | 0.225 | 12.1 | -0.214 | 0.188 | -- | -- | -- | 1.58e-05 | 12.6 | -- | -- | -- | -- |
| 22.22 | 0.22 | 12.1 | -0.151 | -- | 0.364 | -- | -- | -0.0509 | -- | 53.73 | 1022 | -- | -- |
| 21.04 | 0.214 | 12.1 | -- | 0.23 | 0.466 | -- | -- | -0.0217 | 14.4 | 52.97 | 366 | -- | -- |
| 25.32 | 0.235 | 12.1 | -0.221 | -- | -- | -- | -- | -0.00321 | -- | -- | -- | -- | -- |
| 24.31 | 0.231 | 12.1 | -- | 0.192 | -- | -- | -- | 0.0238 | 12.6 | -- | -- | -- | -- |
| 22.53 | 0.221 | 12.1 | -- | -- | 0.346 | -- | -- | -0.0589 | -- | 63.42 | 1051 | -- | -- |
| 26.61 | 0.241 | 12.1 | -- | -- | -- | -- | -- | 0.0213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 3 | 17.68 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 4 | 17.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 16 | 18.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 25 | 18.24 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 28 | 18.25 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 9 |
| 61 | 18.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 62 | 18.51 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 65 | 18.52 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 73 | 18.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 79 | 18.59 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 85 | 18.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 88 | 18.61 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 94 | 18.64 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 95 | 18.64 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 96 | 18.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 8 |
| 99 | 18.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 101 | 18.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 107 | 18.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 108 | 18.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 110 | 18.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 111 | 18.66 | radiation | 30.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 113 | 18.66 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 114 | 18.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 116 | 18.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 117 | 18.67 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 120 | 18.67 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 121 | 18.67 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 122 | 18.67 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 126 | 18.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 127 | 18.67 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 132 | 18.68 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 135 | 18.68 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 136 | 18.68 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 141 | 18.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 147 | 18.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 148 | 18.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 149 | 18.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 8 |
| 150 | 18.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 151 | 18.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 153 | 18.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 172 | 18.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 16 |
| 174 | 18.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 16 |
| 184 | 18.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 229 | 18.80 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 24 | 14 |
| 236 | 18.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 18 |
| 239 | 18.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 248 | 18.83 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 251 | 18.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 261 | 18.85 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 262 | 18.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 16 |
| 263 | 18.85 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 266 | 18.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 319 | 18.90 | radiation | 1.0 | 270 | < th | dose independent | sin | 5 | NA |
| 345 | 18.93 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 360 | 18.95 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 373 | 18.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 377 | 18.96 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 388 | 18.97 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 418 | 19.00 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 424 | 19.01 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 7 |
| 428 | 19.01 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 9 |
| 431 | 19.01 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 453 | 19.03 | radiation | 1.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 474 | 19.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 523 | 19.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 541 | 19.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 563 | 19.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 17 |
| 570 | 19.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 572 | 19.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 7 |
| 618 | 19.13 | radiation | 1.0 | 270 | > th | dose independent | sin | 17 | NA |
| 623 | 19.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 641 | 19.14 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 663 | 19.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 7 |
| 665 | 19.15 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 668 | 19.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 684 | 19.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 7 |
| 686 | 19.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 688 | 19.15 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 697 | 19.16 | radiation | 1.0 | 270 | < th | dose dependent | sin | 17 | NA |
| 702 | 19.16 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 713 | 19.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 717 | 19.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 729 | 19.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 734 | 19.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 736 | 19.19 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 737 | 19.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 822 | 19.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 840 | 19.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 841 | 19.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 842 | 19.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 843 | 19.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 6 |
| 850 | 19.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 853 | 19.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 18 |
| 854 | 19.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 864 | 19.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 880 | 19.26 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 2 | 18 |
| 883 | 19.27 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 8 |
| 891 | 19.27 | radiation | 40.0 | 10 | < th | dose independent | rect. | 2 | 18 |
| 902 | 19.28 | radiation | 1.0 | 270 | < th | dose independent | sin | 17 | NA |
| 938 | 19.28 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 948 | 19.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 967 | 19.29 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 17 |
| 972 | 19.29 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 982 | 19.29 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 17 |