Os03g0385900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial ribosomal protein S11 (Nuclear encoded).
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Os03g0385900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial ribosomal protein S11 (Nuclear encoded).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.18 | 0.286 | 11.8 | 0.344 | 0.376 | 0.41 | 0.0159 | 0.0218 | -0.132 | 0.143 | 69 | 1210 | -- | -- |
| 37.18 | 0.284 | 11.8 | 0.347 | 0.379 | 0.412 | 0.0124 | -- | -0.131 | 0.129 | 68.79 | 1203 | -- | -- |
| 37.18 | 0.284 | 11.8 | 0.344 | 0.376 | 0.41 | -- | 0.0149 | -0.132 | 0.147 | 69 | 1208 | -- | -- |
| 37.18 | 0.284 | 11.8 | 0.346 | 0.377 | 0.411 | -- | -- | -0.131 | 0.145 | 69 | 1208 | -- | -- |
| 43.53 | 0.307 | 11.8 | 0.285 | -- | 0.35 | -- | 0.297 | -0.111 | -- | 72.01 | 1530 | -- | -- |
| 43.3 | 0.308 | 11.8 | 0.258 | 0.275 | -- | -0.0636 | -- | -0.132 | 0.00751 | -- | -- | -- | -- |
| 43.31 | 0.308 | 11.8 | 0.261 | 0.275 | -- | -- | -- | -0.132 | 23.9 | -- | -- | -- | -- |
| 42.84 | 0.305 | 11.8 | 0.325 | -- | 0.397 | -- | -- | -0.0802 | -- | 74.61 | 1540 | -- | -- |
| 40.25 | 0.295 | 11.8 | -- | 0.368 | 0.361 | -- | -- | -0.169 | 0.183 | 68.33 | 1210 | -- | -- |
| 48.08 | 0.324 | 11.8 | 0.269 | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
| 45.1 | 0.314 | 11.8 | -- | 0.278 | -- | -- | -- | -0.161 | 24 | -- | -- | -- | -- |
| 45.44 | 0.314 | 11.8 | -- | -- | 0.452 | -- | -- | -0.126 | -- | 75.57 | 1610 | -- | -- |
| 49.98 | 0.33 | 11.8 | -- | -- | -- | -- | -- | -0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.01 | temperature | 20.0 | 30 | > th | dose independent | rect. | 19 | 9 |
| 11 | 36.90 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 13 | 37.00 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 19 | 37.13 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 25 | 37.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 31 | 37.34 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 38 | 37.42 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 43 | 37.44 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 57 | 37.58 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 60 | 37.61 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 62 | 37.62 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 63 | 37.62 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 96 | 37.80 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 19 |
| 102 | 37.83 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 108 | 37.87 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 19 |
| 126 | 37.95 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 135 | 37.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 139 | 37.99 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 141 | 38.02 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 3 |
| 143 | 38.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 167 | 38.07 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 14 |
| 174 | 38.08 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 180 | 38.09 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 183 | 38.10 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 189 | 38.10 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 223 | 38.16 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 258 | 38.21 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 264 | 38.22 | humidity | 80.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 273 | 38.24 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 288 | 38.26 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 316 | 38.32 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 322 | 38.33 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 323 | 38.33 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 332 | 38.34 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 11 |
| 350 | 38.36 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 3 |
| 362 | 38.38 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 400 | 38.42 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 409 | 38.44 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 3 |
| 427 | 38.47 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 430 | 38.47 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 431 | 38.47 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 438 | 38.48 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 9 | 5 |
| 449 | 38.50 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 463 | 38.52 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 472 | 38.53 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 482 | 38.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 497 | 38.56 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 503 | 38.57 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 515 | 38.58 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 19 |
| 523 | 38.59 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 524 | 38.59 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 553 | 38.61 | humidity | 50.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 583 | 38.64 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 584 | 38.64 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 616 | 38.67 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 14 |
| 624 | 38.68 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 626 | 38.68 | wind | 5.0 | 30 | < th | dose independent | rect. | 19 | 9 |
| 627 | 38.68 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 9 |
| 648 | 38.69 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 15 |
| 649 | 38.69 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 672 | 38.72 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 691 | 38.74 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 694 | 38.75 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 700 | 38.75 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 9 |
| 704 | 38.75 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 739 | 38.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 743 | 38.77 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 747 | 38.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 749 | 38.77 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 18 |
| 789 | 38.81 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 802 | 38.82 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 835 | 38.83 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 843 | 38.84 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 873 | 38.85 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 3 | NA |
| 927 | 38.88 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 942 | 38.89 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 952 | 38.89 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 959 | 38.90 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 960 | 38.90 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 22 |