Os03g0385100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os03g0385100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 168.91 | 0.611 | 2.94 | 0.661 | 0.19 | -5 | 0.0917 | 46.8 | -0.0238 | 21.9 | 34.16 | 125 | -- | -- |
| 177.16 | 0.625 | 2.99 | 0.283 | 0.192 | 0.562 | 0.0746 | -- | -0.0266 | 21.5 | 34.16 | 125 | -- | -- |
| 168.92 | 0.605 | 2.94 | 0.657 | 0.19 | -5.13 | -- | 47.7 | -0.0241 | 21.7 | 34.21 | 129 | -- | -- |
| 170.41 | 0.608 | 2.98 | 0.278 | 0.207 | 2.62 | -- | -- | -0.00842 | 21.6 | 35.52 | 219 | -- | -- |
| 171.06 | 0.609 | 2.93 | 0.63 | -- | -5.13 | -- | 47.9 | -0.0232 | -- | 34.29 | 129 | -- | -- |
| 177.6 | 0.625 | 2.99 | 0.287 | 0.192 | -- | 0.0596 | -- | -0.0289 | 21.3 | -- | -- | -- | -- |
| 177.61 | 0.624 | 2.99 | 0.286 | 0.192 | -- | -- | -- | -0.0288 | 21.2 | -- | -- | -- | -- |
| 172.4 | 0.612 | 2.98 | 0.272 | -- | 2.72 | -- | -- | -0.0237 | -- | 35.52 | 219 | -- | -- |
| 172.28 | 0.611 | 2.99 | -- | 0.186 | 2.75 | -- | -- | -0.0535 | 21.9 | 35.53 | 192 | -- | -- |
| 179.76 | 0.626 | 2.98 | 0.286 | -- | -- | -- | -- | -0.0297 | -- | -- | -- | -- | -- |
| 179.76 | 0.627 | 2.99 | -- | 0.192 | -- | -- | -- | -0.0606 | 21.3 | -- | -- | -- | -- |
| 174.35 | 0.615 | 2.99 | -- | -- | 2.75 | -- | -- | -0.0538 | -- | 35.51 | 213 | -- | -- |
| 181.92 | 0.63 | 2.99 | -- | -- | -- | -- | -- | -0.0615 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.63 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 2 | 1 |
| 2 | 160.63 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 165.98 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 10 | 165.98 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 17 | 166.05 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 29 | 167.09 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 30 | 167.28 | humidity | 70.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 41 | 167.33 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 46 | 167.61 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 61 | 168.24 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 80 | 168.63 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 1 | 16 |
| 115 | 168.92 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 125 | 169.34 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 127 | 169.35 | wind | 7.0 | 30 | > th | dose dependent | rect. | 16 | 2 |
| 130 | 169.42 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 143 | 169.56 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 3 |
| 167 | 169.71 | temperature | 30.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 168 | 169.73 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 172 | 169.77 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 175 | 169.82 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 196 | 170.04 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 6 | NA |
| 215 | 170.12 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 24 | 16 |
| 222 | 170.24 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 21 |
| 227 | 170.30 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 24 | 5 |
| 229 | 170.34 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 233 | 170.36 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 235 | 170.38 | humidity | 50.0 | 270 | < th | dose independent | rect. | 13 | 1 |
| 236 | 170.38 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 256 | 170.57 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 269 | 170.67 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 319 | 170.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 322 | 170.75 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 326 | 170.75 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 328 | 170.75 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 332 | 170.75 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 352 | 170.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 355 | 170.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 361 | 170.76 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 368 | 170.78 | wind | 1.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 384 | 170.82 | wind | 9.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 399 | 170.90 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 408 | 170.97 | wind | 5.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 429 | 170.99 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 10 |
| 441 | 171.09 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 16 | 3 |
| 448 | 171.12 | humidity | 80.0 | 90 | > th | dose independent | rect. | 15 | 8 |
| 449 | 171.12 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 11 |
| 467 | 171.15 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 468 | 171.15 | humidity | 80.0 | 90 | < th | dose independent | rect. | 12 | 12 |
| 484 | 171.18 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 16 | 3 |
| 485 | 171.20 | humidity | 90.0 | 90 | > th | dose independent | rect. | 16 | 2 |
| 490 | 171.22 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 16 | 2 |
| 491 | 171.23 | humidity | 80.0 | 10 | < th | dose independent | rect. | 12 | 13 |
| 496 | 171.24 | humidity | 80.0 | 90 | > th | dose independent | rect. | 15 | 10 |
| 498 | 171.25 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 17 | 3 |
| 501 | 171.25 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 1 | 6 |
| 507 | 171.28 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 1 |
| 519 | 171.32 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 5 |
| 523 | 171.33 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 555 | 171.48 | temperature | 30.0 | 30 | > th | dose independent | rect. | 16 | 1 |
| 565 | 171.51 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 5 |
| 622 | 171.64 | radiation | 30.0 | 720 | < th | dose independent | rect. | 14 | 2 |
| 627 | 171.66 | humidity | 80.0 | 90 | > th | dose independent | sin | 17 | NA |
| 633 | 171.67 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 16 |
| 642 | 171.70 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 15 | 8 |
| 648 | 171.73 | wind | 5.0 | 10 | < th | dose independent | rect. | 17 | 3 |
| 654 | 171.75 | humidity | 80.0 | 90 | < th | dose independent | rect. | 12 | 8 |
| 657 | 171.76 | wind | 5.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 673 | 171.80 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 20 | 21 |
| 681 | 171.83 | humidity | 80.0 | 30 | < th | dose independent | sin | 16 | NA |
| 702 | 171.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 705 | 171.88 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 709 | 171.88 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 714 | 171.88 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 715 | 171.88 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 719 | 171.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 13 |
| 725 | 171.89 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 15 |
| 742 | 171.91 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 768 | 171.95 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 6 |
| 770 | 171.95 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 810 | 172.01 | humidity | 80.0 | 10 | < th | dose independent | rect. | 12 | 8 |
| 860 | 172.04 | humidity | 70.0 | 90 | > th | dose dependent | sin | 18 | NA |
| 887 | 172.06 | humidity | 80.0 | 270 | > th | dose independent | rect. | 11 | 12 |
| 904 | 172.07 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 16 |
| 906 | 172.08 | wind | 3.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 909 | 172.08 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 16 |
| 935 | 172.11 | wind | 3.0 | 10 | < th | dose independent | rect. | 18 | 1 |
| 956 | 172.11 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 18 | 22 |