Os03g0381500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0381500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.87 | 0.39 | 8.3 | -0.366 | 1.69 | 0.967 | 0.0957 | -1.84 | -0.127 | 0.323 | 10.03 | 27 | -- | -- |
| 70.9 | 0.392 | 8.26 | -0.103 | 1.7 | 0.955 | 0.511 | -- | -0.0588 | 0.349 | 9.064 | 26 | -- | -- |
| 68.9 | 0.387 | 8.3 | -0.385 | 1.69 | 0.966 | -- | -1.95 | -0.132 | 0.323 | 11.78 | 26 | -- | -- |
| 72.02 | 0.395 | 8.27 | -0.118 | 1.7 | 0.934 | -- | -- | -0.0581 | 0.349 | 10.1 | 26 | -- | -- |
| 203.14 | 0.667 | 8.2 | 0.0622 | -- | -0.781 | -- | -1.32 | 0.161 | -- | 17.93 | 7 | -- | -- |
| 79.42 | 0.418 | 8.23 | 0.0823 | 1.48 | -- | 0.435 | -- | 0.0752 | 24 | -- | -- | -- | -- |
| 80.24 | 0.419 | 8.24 | 0.0648 | 1.48 | -- | -- | -- | 0.0732 | 24 | -- | -- | -- | -- |
| 204.63 | 0.669 | 8.18 | 0.268 | -- | -0.806 | -- | -- | 0.221 | -- | 18.9 | 6 | -- | -- |
| 72.36 | 0.396 | 8.26 | -- | 1.68 | 0.876 | -- | -- | -0.0382 | 0.326 | 11.39 | 26 | -- | -- |
| 218.48 | 0.691 | 8.2 | 0.111 | -- | -- | -- | -- | 0.0936 | -- | -- | -- | -- | -- |
| 80.35 | 0.419 | 8.24 | -- | 1.48 | -- | -- | -- | 0.0659 | 24 | -- | -- | -- | -- |
| 205.33 | 0.667 | 8.19 | -- | -- | -0.727 | -- | -- | 0.147 | -- | 24.2 | 2 | -- | -- |
| 218.8 | 0.69 | 8.21 | -- | -- | -- | -- | -- | 0.0813 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.69 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 18 | 67.82 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 19 | 67.87 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 22 | 67.91 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 26 | 67.99 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 17 | 7 |
| 29 | 68.00 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 32 | 68.03 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 35 | 68.07 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 42 | 68.11 | humidity | 80.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 44 | 68.11 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 18 | 6 |
| 48 | 68.13 | temperature | 25.0 | 30 | < th | dose dependent | sin | 21 | NA |
| 51 | 68.14 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 62 | 68.18 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 15 | 16 |
| 65 | 68.19 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 17 | 13 |
| 76 | 68.22 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 19 |
| 78 | 68.22 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 88 | 68.25 | humidity | 80.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 90 | 68.25 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 100 | 68.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 104 | 68.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 107 | 68.27 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 15 | 20 |
| 119 | 68.30 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 121 | 68.30 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 14 | 16 |
| 126 | 68.31 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 152 | 68.32 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 163 | 68.32 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 10 | 22 |
| 172 | 68.33 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 21 |
| 180 | 68.34 | temperature | 15.0 | 10 | > th | dose dependent | sin | 21 | NA |
| 203 | 68.35 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 217 | 68.35 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 237 | 68.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 241 | 68.37 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 244 | 68.37 | humidity | 90.0 | 43200 | < th | dose dependent | no | NA | NA |
| 245 | 68.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 263 | 68.37 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 264 | 68.38 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 298 | 68.39 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 21 | 23 |
| 303 | 68.40 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 344 | 68.41 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 10 | 16 |
| 373 | 68.43 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 410 | 68.45 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 461 | 68.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 509 | 68.50 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 601 | 68.54 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 710 | 68.59 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 711 | 68.59 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 17 | 9 |
| 715 | 68.59 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 764 | 68.61 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 4 | NA |
| 782 | 68.61 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 843 | 68.64 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 7 |
| 886 | 68.65 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 950 | 68.68 | humidity | 60.0 | 43200 | > th | dose independent | sin | 12 | NA |