Os03g0378200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : GWT1 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0378200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : GWT1 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.32 | 0.397 | 7.32 | -1.37 | 0.918 | 0.557 | -0.544 | 0.0838 | -0.0937 | 6.8 | 21.2 | 865 | -- | -- |
| 71.3 | 0.393 | 7.33 | -1.39 | 0.901 | 0.553 | -0.558 | -- | -0.102 | 6.82 | 21.3 | 954 | -- | -- |
| 72 | 0.395 | 7.32 | -1.36 | 0.895 | 0.559 | -- | 0.203 | -0.084 | 6.86 | 21.3 | 952 | -- | -- |
| 72.08 | 0.395 | 7.33 | -1.4 | 0.905 | 0.557 | -- | -- | -0.103 | 6.88 | 21.38 | 952 | -- | -- |
| 110.6 | 0.49 | 7.34 | -1.32 | -- | 0.609 | -- | 0.372 | -0.0768 | -- | 21.4 | 1366 | -- | -- |
| 81.1 | 0.422 | 7.3 | -1.18 | 0.868 | -- | -0.702 | -- | 0.0492 | 6.42 | -- | -- | -- | -- |
| 82.28 | 0.425 | 7.29 | -1.19 | 0.865 | -- | -- | -- | 0.0519 | 6.54 | -- | -- | -- | -- |
| 110.99 | 0.491 | 7.35 | -1.41 | -- | 0.589 | -- | -- | -0.099 | -- | 21.47 | 1348 | -- | -- |
| 117.77 | 0.505 | 7.28 | -- | 0.865 | 0.192 | -- | -- | 0.115 | 6.65 | 22.2 | 910 | -- | -- |
| 121.22 | 0.514 | 7.31 | -1.17 | -- | -- | -- | -- | 0.0697 | -- | -- | -- | -- | -- |
| 119.62 | 0.512 | 7.26 | -- | 0.85 | -- | -- | -- | 0.184 | 6.62 | -- | -- | -- | -- |
| 132.45 | 0.536 | 7.23 | -- | -- | -0.741 | -- | -- | 0.444 | -- | 21.01 | 46752 | -- | -- |
| 157.28 | 0.585 | 7.28 | -- | -- | -- | -- | -- | 0.199 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 69.62 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 6 | 69.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 7 | 69.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 8 | 69.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 9 | 69.88 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 11 | 70.05 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 15 | 70.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 16 | 70.10 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 30 | 70.53 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 37 | 70.70 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 3 |
| 38 | 70.74 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 39 | 70.76 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 49 | 70.77 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 58 | 70.80 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 68 | 70.85 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 74 | 70.88 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 77 | 70.90 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 97 | 71.01 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 98 | 71.01 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 147 | 71.15 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 150 | 71.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 162 | 71.16 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 173 | 71.24 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 241 | 71.49 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 245 | 71.50 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 5 | 17 |
| 261 | 71.55 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 275 | 71.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 279 | 71.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 309 | 71.89 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 328 | 71.93 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 332 | 71.95 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 333 | 71.95 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 340 | 72.00 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 342 | 72.00 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 346 | 72.02 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 350 | 72.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 353 | 72.07 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 356 | 72.08 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 357 | 72.08 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 366 | 72.12 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 376 | 72.15 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 378 | 72.16 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 397 | 72.18 | temperature | 25.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 408 | 72.21 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 414 | 72.23 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 415 | 72.24 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 20 |
| 418 | 72.24 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 424 | 72.27 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 441 | 72.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 442 | 72.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 452 | 72.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 461 | 72.33 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 487 | 72.44 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 498 | 72.46 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 508 | 72.48 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 14 |
| 519 | 72.51 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 522 | 72.52 | temperature | 25.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 532 | 72.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 542 | 72.56 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 549 | 72.57 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 12 |
| 561 | 72.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 566 | 72.60 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 567 | 72.60 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 570 | 72.60 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 14 |
| 585 | 72.63 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 594 | 72.63 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 601 | 72.64 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 611 | 72.65 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 616 | 72.66 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 636 | 72.70 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 641 | 72.71 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 658 | 72.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 17 |
| 675 | 72.75 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 682 | 72.76 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 709 | 72.81 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 729 | 72.83 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 730 | 72.84 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 744 | 72.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 785 | 72.90 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 790 | 72.90 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 801 | 72.93 | temperature | 10.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 814 | 72.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 853 | 72.98 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 863 | 72.99 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 884 | 73.01 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 892 | 73.02 | wind | 9.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 924 | 73.04 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 925 | 73.05 | temperature | 20.0 | 720 | > th | dose independent | sin | 5 | NA |
| 943 | 73.06 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 945 | 73.07 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 952 | 73.07 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 953 | 73.08 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 983 | 73.09 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 984 | 73.09 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 996 | 73.11 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |