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Os03g0367900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase C15, pyroglutamyl peptidase I family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0154) R2 : 0.639
β1 : -0.838 (0.0563) R2dD : 0.182 R2D : 0.169
β2 : 0.89 (0.0366) R2dC : 0.47 R2C : 0.458
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00717 (0.0328) R2dN8 : 5.06e-05 R2N8 : -0.00176
σ : 0.289
deviance : 38.11
__
_____
C
peak time of C : 0.74
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.11 0.27 12.2 -0.94 0.858 -0.243 -0.38 1.08 -0.0666 0.925 91.42 754 -- --
35.09 0.276 12.2 -0.84 0.84 -0.249 -0.686 -- -0.0544 0.906 89.61 810 -- --
33.57 0.27 12.2 -0.952 0.864 -0.222 -- 1.29 -0.0653 0.881 92.21 761 -- --
37.03 0.283 12.2 -0.811 0.844 -0.255 -- -- -0.0506 0.997 88.85 779 -- --
68.98 0.387 12.3 -0.997 -- -0.897 -- 1.34 -0.216 -- 79.9 946 -- --
36.15 0.282 12.2 -0.863 0.887 -- -0.679 -- -0.0103 0.676 -- -- -- --
38.11 0.289 12.2 -0.838 0.89 -- -- -- -0.00717 0.74 -- -- -- --
62.78 0.371 12.2 -0.836 -- 0.625 -- -- 0.0671 -- 72 995 -- --
53.69 0.341 12.2 -- 0.878 -0.42 -- -- 0.00704 0.661 84.84 1450 -- --
87.59 0.437 12.2 -0.806 -- -- -- -- 0.00887 -- -- -- -- --
56.63 0.352 12.2 -- 0.876 -- -- -- 0.0862 0.696 -- -- -- --
81.18 0.421 12.1 -- -- 0.609 -- -- 0.158 -- 72 995 -- --
104.73 0.478 12.2 -- -- -- -- -- 0.0983 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.96 temperature 20.0 270 > th dose dependent rect. 1 7
21 31.24 temperature 20.0 270 > th dose independent rect. 2 7
23 31.31 radiation 1.0 14400 < th dose dependent rect. 20 1
37 31.60 temperature 20.0 10 > th dose dependent rect. 2 7
49 31.78 temperature 20.0 720 > th dose dependent rect. 22 7
71 32.01 wind 1.0 4320 < th dose dependent rect. 2 4
86 32.21 wind 1.0 4320 < th dose independent rect. 2 4
92 32.22 temperature 10.0 720 > th dose dependent rect. 21 8
115 32.37 humidity 60.0 10 > th dose dependent rect. 19 1
126 32.41 wind 1.0 4320 > th dose independent rect. 1 5
131 32.41 radiation 40.0 270 < th dose dependent rect. 15 16
141 32.45 humidity 70.0 10 > th dose independent rect. 19 1
154 32.49 wind 9.0 90 < th dose dependent rect. 18 15
158 32.51 temperature 20.0 30 > th dose independent rect. 4 16
175 32.54 temperature 30.0 720 < th dose dependent rect. 20 11
181 32.56 atmosphere 1000.0 30 > th dose independent rect. 20 8
182 32.56 humidity 50.0 270 > th dose independent rect. 15 16
183 32.56 radiation 20.0 270 < th dose independent rect. 15 16
188 32.57 radiation 1.0 90 > th dose independent rect. 9 10
202 32.57 temperature 30.0 720 < th dose dependent rect. 22 8
232 32.63 humidity 90.0 1440 > th dose independent rect. 21 1
245 32.64 radiation 40.0 270 < th dose dependent rect. 12 8
256 32.67 temperature 20.0 270 > th dose independent rect. 3 17
285 32.73 radiation 30.0 90 < th dose independent rect. 18 15
296 32.75 wind 1.0 90 > th dose independent rect. 9 9
305 32.76 temperature 15.0 1440 > th dose independent rect. 10 9
312 32.77 humidity 60.0 90 > th dose independent rect. 18 15
313 32.77 wind 3.0 4320 < th dose dependent rect. 2 1
329 32.79 precipitation 0.1 270 < th dose independent rect. 16 15
338 32.79 precipitation 0.1 270 < th dose dependent rect. 16 15
349 32.81 temperature 10.0 1440 > th dose independent rect. 20 1
352 32.81 temperature 30.0 1440 < th dose independent rect. 20 1
356 32.81 humidity 50.0 1440 > th dose independent rect. 20 1
362 32.81 atmosphere 995.0 1440 > th dose independent rect. 20 1
366 32.81 radiation 1.0 1440 < th dose independent rect. 20 1
386 32.81 wind 9.0 90 < th dose independent rect. 9 9
388 32.81 temperature 10.0 1440 > th dose independent rect. 21 23
407 32.83 temperature 10.0 90 > th dose independent rect. 9 9
408 32.83 atmosphere 1015.0 90 < th dose independent rect. 9 9
409 32.83 temperature 10.0 90 > th dose independent rect. 18 15
417 32.84 wind 9.0 90 < th dose independent rect. 18 15
428 32.85 atmosphere 995.0 90 > th dose independent rect. 18 15
430 32.85 humidity 50.0 30 > th dose dependent rect. 20 8
434 32.86 humidity 90.0 1440 < th dose independent rect. 20 3
435 32.86 humidity 90.0 720 > th dose dependent rect. 22 1
440 32.86 radiation 1.0 90 < th dose dependent rect. 12 8
452 32.87 temperature 10.0 90 > th dose dependent rect. 18 15
460 32.89 wind 1.0 270 > th dose independent rect. 7 9
476 32.91 wind 5.0 30 < th dose independent rect. 20 8
477 32.91 radiation 1.0 270 > th dose independent rect. 7 9
479 32.91 humidity 90.0 720 > th dose dependent rect. 21 4
483 32.91 humidity 90.0 720 > th dose dependent rect. 20 6
487 32.91 radiation 10.0 30 < th dose dependent rect. 6 14
488 32.91 temperature 10.0 720 > th dose dependent rect. 18 15
492 32.92 humidity 70.0 30 > th dose independent rect. 13 7
495 32.92 atmosphere 1015.0 30 < th dose independent rect. 20 8
496 32.92 temperature 20.0 90 > th dose independent rect. 9 9
497 32.92 temperature 30.0 90 < th dose independent rect. 18 15
503 32.93 humidity 90.0 1440 < th dose independent rect. 21 1
520 32.94 wind 9.0 270 < th dose independent rect. 7 9
521 32.94 precipitation 0.1 270 < th dose independent rect. 7 9
526 32.94 precipitation 0.1 270 < th dose dependent rect. 7 9
532 32.95 humidity 50.0 270 > th dose independent rect. 14 6
533 32.95 temperature 10.0 30 > th dose independent rect. 20 8
534 32.95 temperature 30.0 30 < th dose independent rect. 20 8
535 32.95 humidity 50.0 30 > th dose independent rect. 20 8
539 32.95 radiation 20.0 270 < th dose independent rect. 12 8
540 32.95 radiation 1.0 30 < th dose independent rect. 20 8
545 32.95 wind 9.0 30 < th dose independent rect. 4 16
546 32.95 temperature 10.0 30 > th dose independent rect. 4 16
549 32.95 atmosphere 1015.0 30 < th dose independent rect. 4 16
551 32.95 radiation 1.0 30 < th dose dependent rect. 20 8
561 32.96 humidity 70.0 30 > th dose independent rect. 16 4
562 32.96 temperature 10.0 270 > th dose independent rect. 7 9
563 32.96 atmosphere 1015.0 270 < th dose independent rect. 7 9
565 32.96 temperature 10.0 270 > th dose independent rect. 16 15
577 32.97 wind 1.0 90 > th dose independent rect. 20 22
578 32.97 radiation 1.0 90 < th dose dependent rect. 15 5
586 32.98 humidity 50.0 270 > th dose independent rect. 2 18
599 32.99 temperature 25.0 10 > th dose independent rect. 1 10
601 32.99 temperature 20.0 720 > th dose dependent sin 10 NA
613 33.00 atmosphere 995.0 270 > th dose independent rect. 7 9
624 33.01 humidity 60.0 10 > th dose independent rect. 18 15
630 33.01 humidity 50.0 30 > th dose dependent rect. 4 16
636 33.02 radiation 1.0 90 < th dose independent rect. 12 8
640 33.02 humidity 60.0 270 > th dose dependent rect. 20 6
653 33.03 atmosphere 995.0 30 > th dose independent rect. 4 16
676 33.03 humidity 90.0 720 > th dose dependent rect. 20 16
695 33.05 precipitation 0.1 30 < th dose independent rect. 20 8
699 33.05 temperature 10.0 720 > th dose dependent sin 11 NA
707 33.05 precipitation 0.1 30 < th dose dependent rect. 20 8
728 33.07 atmosphere 995.0 90 > th dose independent rect. 9 9
731 33.07 temperature 30.0 720 < th dose dependent sin 10 NA
748 33.08 precipitation 0.1 90 < th dose independent rect. 9 9
750 33.08 wind 9.0 270 < th dose independent rect. 16 15
751 33.08 humidity 50.0 30 > th dose independent rect. 4 16
752 33.08 precipitation 0.1 30 < th dose independent rect. 4 16
764 33.08 precipitation 0.1 90 < th dose dependent rect. 9 9
774 33.08 precipitation 0.1 30 < th dose dependent rect. 4 16
775 33.08 radiation 30.0 270 < th dose dependent rect. 2 18
781 33.09 radiation 1.0 90 < th dose independent rect. 7 13
784 33.09 humidity 60.0 30 > th dose dependent rect. 13 7
788 33.09 wind 9.0 10 < th dose dependent rect. 18 15
817 33.11 radiation 1.0 90 > th dose independent sin 22 NA
821 33.11 temperature 10.0 43200 > th dose independent rect. 10 9
824 33.11 wind 1.0 270 > th dose independent rect. 9 17
848 33.12 wind 1.0 4320 > th dose independent rect. 16 14
853 33.12 humidity 90.0 1440 < th dose dependent rect. 20 1
861 33.12 wind 9.0 30 < th dose dependent rect. 4 16
868 33.13 radiation 40.0 270 < th dose independent rect. 1 8
869 33.13 temperature 30.0 10 < th dose independent rect. 18 15
872 33.13 atmosphere 1015.0 270 < th dose dependent rect. 15 5
877 33.13 wind 9.0 30 < th dose dependent rect. 20 8
893 33.14 precipitation 0.1 1440 < th dose independent rect. 20 1
895 33.14 radiation 1.0 90 < th dose independent rect. 15 5
906 33.14 humidity 90.0 720 > th dose dependent sin 11 NA
909 33.14 precipitation 0.1 1440 < th dose dependent rect. 20 1
955 33.16 radiation 10.0 30 < th dose independent rect. 4 16
979 33.17 temperature 10.0 1440 > th dose independent rect. 19 15
982 33.17 atmosphere 995.0 1440 > th dose independent rect. 19 15
983 33.17 wind 9.0 270 < th dose independent rect. 9 16