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Os03g0367800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, HIT-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0215) R2 : 0.421
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.996 (0.0563) R2dC : 0.4 R2C : 0.385
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.214 (0.0452) R2dN8 : 0.0368 R2N8 : 0.0217
σ : 0.405
deviance : 75.07
__
_____
C
peak time of C : 18.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.45 0.327 11.4 -0.0885 0.991 0.325 -0.0941 -4.33 0.101 18.4 25.1 4062 -- --
52.83 0.341 11.3 0.843 0.944 0.296 -0.194 -- 0.292 18.8 25.1 4062 -- --
48.38 0.324 11.4 -0.098 0.984 0.36 -- -4.46 0.0969 18.4 25.15 3588 -- --
51.92 0.336 11.2 1 0.993 -0.282 -- -- 0.408 18.4 32.91 12732 -- --
79.93 0.416 11.3 0.0295 -- 1.2 -- -4.59 0.0355 -- 24.5 509 -- --
54.16 0.345 11.3 0.889 1.01 -- -0.0859 -- 0.314 18.4 -- -- -- --
54.18 0.345 11.3 0.89 1.01 -- -- -- 0.313 18.4 -- -- -- --
86.06 0.432 11.3 0.727 -- 0.872 -- -- 0.196 -- 23.9 337 -- --
59.52 0.359 11.3 -- 1.01 0.635 -- -- 0.0247 18.4 7.292 47520 -- --
106.92 0.483 11.2 0.864 -- -- -- -- 0.292 -- -- -- -- --
75.07 0.405 11.3 -- 0.996 -- -- -- 0.214 18.5 -- -- -- --
99.18 0.464 11.3 -- -- 0.964 -- -- 0.106 -- 23.8 327 -- --
126.62 0.525 11.3 -- -- -- -- -- 0.196 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.92 temperature 15.0 270 > th dose independent rect. 7 20
2 38.97 wind 7.0 270 < th dose independent rect. 7 20
3 39.12 wind 9.0 270 < th dose independent rect. 6 22
4 39.13 wind 7.0 90 < th dose independent rect. 9 19
6 39.26 precipitation 0.1 270 < th dose independent rect. 7 20
7 39.26 precipitation 0.1 270 < th dose dependent rect. 7 20
9 39.43 precipitation 0.1 270 < th dose independent rect. 6 22
10 39.43 precipitation 0.1 270 < th dose dependent rect. 6 22
11 39.47 temperature 15.0 90 > th dose independent rect. 9 19
12 39.60 wind 5.0 270 < th dose independent rect. 3 4
13 39.63 temperature 10.0 90 > th dose dependent rect. 8 20
15 39.66 temperature 10.0 10 > th dose dependent rect. 9 20
18 39.70 wind 5.0 270 < th dose independent rect. 4 2
24 39.83 precipitation 0.1 270 < th dose independent rect. 3 4
26 39.83 precipitation 0.1 90 < th dose independent rect. 9 19
27 39.83 precipitation 0.1 270 < th dose dependent rect. 3 4
28 39.83 precipitation 0.1 90 < th dose dependent rect. 9 19
30 39.88 temperature 10.0 270 > th dose independent rect. 3 4
32 39.88 temperature 30.0 270 < th dose independent rect. 3 4
33 39.88 humidity 50.0 270 > th dose independent rect. 3 4
35 39.88 atmosphere 995.0 270 > th dose independent rect. 3 4
36 39.88 atmosphere 1015.0 270 < th dose independent rect. 3 4
37 39.88 radiation 40.0 270 < th dose independent rect. 3 4
43 39.96 precipitation 0.1 270 < th dose independent rect. 4 2
44 39.96 precipitation 0.1 270 < th dose dependent rect. 4 2
45 39.99 wind 9.0 90 < th dose dependent rect. 9 19
46 40.03 wind 9.0 270 < th dose dependent rect. 7 20
48 40.05 temperature 10.0 270 > th dose independent rect. 4 2
50 40.05 temperature 30.0 270 < th dose independent rect. 4 2
51 40.05 humidity 50.0 270 > th dose independent rect. 4 2
54 40.05 atmosphere 995.0 270 > th dose independent rect. 4 2
55 40.05 atmosphere 1015.0 270 < th dose independent rect. 4 2
56 40.05 radiation 20.0 270 < th dose independent rect. 4 2
68 40.13 wind 9.0 270 < th dose dependent rect. 4 2
70 40.15 radiation 40.0 270 < th dose dependent rect. 3 4
73 40.20 wind 9.0 270 < th dose dependent rect. 3 4
74 40.20 wind 9.0 270 < th dose dependent rect. 7 8
77 40.25 wind 7.0 10 < th dose independent rect. 9 20
78 40.25 temperature 15.0 10 > th dose independent rect. 9 20
80 40.27 radiation 40.0 270 < th dose dependent rect. 4 2
114 40.49 temperature 15.0 270 > th dose independent rect. 18 9
127 40.52 temperature 10.0 90 > th dose dependent rect. 8 7
135 40.61 wind 7.0 270 < th dose independent rect. 7 8
149 40.66 humidity 50.0 270 > th dose dependent rect. 4 2
150 40.66 humidity 50.0 270 > th dose dependent rect. 3 4
155 40.71 atmosphere 995.0 270 > th dose independent rect. 7 20
157 40.73 atmosphere 995.0 90 > th dose independent rect. 9 19
176 40.93 precipitation 0.1 270 < th dose independent rect. 18 9
178 40.93 precipitation 0.1 270 < th dose dependent rect. 18 9
180 40.94 precipitation 0.1 10 < th dose independent rect. 9 20
181 40.94 precipitation 0.1 10 < th dose dependent rect. 9 20
193 41.00 wind 5.0 10 < th dose independent rect. 5 4
204 41.02 temperature 10.0 1440 > th dose independent rect. 5 5
207 41.02 atmosphere 995.0 1440 > th dose independent rect. 5 5
208 41.02 atmosphere 1015.0 1440 < th dose independent rect. 5 5
209 41.02 temperature 10.0 1440 > th dose independent rect. 10 19
213 41.02 wind 9.0 90 < th dose dependent rect. 9 6
219 41.05 precipitation 0.1 10 < th dose independent rect. 5 4
222 41.05 precipitation 0.1 10 < th dose dependent rect. 5 4
225 41.07 temperature 10.0 10 > th dose independent rect. 5 4
227 41.07 temperature 30.0 10 < th dose independent rect. 5 4
228 41.07 humidity 50.0 10 > th dose independent rect. 5 4
230 41.07 atmosphere 995.0 10 > th dose independent rect. 5 4
231 41.07 atmosphere 1015.0 10 < th dose independent rect. 5 4
244 41.09 radiation 1.0 270 < th dose dependent rect. 4 14
248 41.11 radiation 1.0 270 > th dose independent rect. 7 7
251 41.15 atmosphere 995.0 10 > th dose independent rect. 9 20
255 41.18 wind 9.0 270 < th dose independent rect. 18 9
256 41.18 radiation 10.0 270 < th dose independent rect. 18 9
257 41.18 radiation 1.0 270 < th dose independent rect. 3 15
260 41.19 humidity 50.0 270 > th dose independent rect. 18 9
264 41.19 temperature 10.0 270 > th dose independent rect. 3 15
265 41.19 atmosphere 1015.0 270 < th dose independent rect. 3 15
267 41.19 radiation 40.0 270 < th dose dependent rect. 18 9
269 41.20 radiation 20.0 270 < th dose dependent rect. 18 9
273 41.23 atmosphere 995.0 270 > th dose independent rect. 18 9
275 41.23 atmosphere 995.0 270 > th dose dependent rect. 4 2
284 41.27 temperature 10.0 10 > th dose dependent rect. 9 6
303 41.37 wind 9.0 10 < th dose dependent rect. 5 4
316 41.45 temperature 10.0 270 > th dose dependent rect. 4 2
322 41.48 temperature 15.0 270 > th dose independent rect. 7 7
323 41.48 precipitation 0.1 270 < th dose independent rect. 7 7
325 41.48 precipitation 0.1 270 < th dose dependent rect. 7 7
351 41.60 atmosphere 995.0 270 > th dose independent rect. 7 7
352 41.60 atmosphere 1015.0 270 < th dose independent rect. 7 7
354 41.60 temperature 10.0 270 > th dose independent rect. 14 17
380 41.64 radiation 10.0 10 < th dose dependent sin 11 NA
383 41.64 temperature 30.0 270 < th dose dependent rect. 3 4
390 41.67 atmosphere 995.0 90 > th dose dependent rect. 4 4
419 41.73 temperature 10.0 90 > th dose dependent rect. 4 4
430 41.76 radiation 1.0 30 > th dose independent rect. 18 15
435 41.77 temperature 10.0 10 > th dose dependent rect. 5 4
437 41.78 radiation 1.0 10 > th dose independent rect. 5 4
459 41.81 temperature 30.0 270 < th dose independent rect. 18 9
489 41.88 precipitation 0.1 270 < th dose independent rect. 3 15
492 41.88 precipitation 0.1 270 < th dose dependent rect. 3 15
512 41.91 atmosphere 995.0 10 > th dose dependent rect. 5 4
513 41.92 humidity 50.0 270 > th dose independent rect. 7 20
540 41.96 wind 9.0 270 < th dose independent rect. 14 17
542 41.97 humidity 90.0 90 < th dose independent rect. 9 6
546 41.98 radiation 40.0 270 < th dose independent rect. 14 17
552 41.99 temperature 10.0 43200 > th dose independent rect. 10 6
579 42.06 temperature 15.0 10 > th dose independent rect. 20 9
640 42.18 radiation 1.0 10 > th dose independent rect. 9 7
645 42.20 wind 1.0 270 > th dose independent rect. 3 4
679 42.30 atmosphere 1015.0 90 < th dose independent rect. 9 19
683 42.33 wind 9.0 270 < th dose independent rect. 3 15
765 42.48 radiation 1.0 270 < th dose independent rect. 3 11
772 42.49 wind 9.0 10 < th dose independent rect. 9 7
783 42.51 radiation 1.0 270 < th dose dependent rect. 4 9
785 42.52 wind 9.0 1440 < th dose independent rect. 5 4
789 42.52 humidity 50.0 1440 > th dose independent rect. 5 4
793 42.52 precipitation 0.1 270 < th dose independent rect. 14 17
797 42.52 precipitation 0.1 270 < th dose dependent rect. 14 17
798 42.53 humidity 50.0 270 > th dose independent rect. 7 7
801 42.54 atmosphere 1015.0 270 < th dose independent rect. 7 20
833 42.59 atmosphere 1015.0 10 < th dose independent rect. 9 20
845 42.61 atmosphere 995.0 10 > th dose independent rect. 9 7
847 42.61 radiation 1.0 270 < th dose independent rect. 3 7
880 42.64 atmosphere 995.0 90 > th dose independent rect. 15 17
881 42.65 temperature 20.0 10 > th dose independent rect. 9 6
925 42.69 temperature 10.0 270 > th dose dependent rect. 20 16
952 42.75 temperature 10.0 10 > th dose independent rect. 9 6
956 42.75 atmosphere 1015.0 10 < th dose independent rect. 9 6
957 42.75 precipitation 0.1 10 < th dose independent rect. 9 6
959 42.75 temperature 10.0 10 > th dose independent rect. 15 18
960 42.75 precipitation 0.1 10 < th dose dependent rect. 9 6