Os03g0359100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0359100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.98 | 0.215 | 10.4 | -0.625 | 0.338 | -1.46 | 0.651 | 0.345 | -0.014 | 6.63 | 28.62 | 694 | -- | -- |
| 21.08 | 0.214 | 10.4 | -0.56 | 0.324 | -1.47 | 0.714 | -- | 0.00208 | 6.75 | 28.44 | 709 | -- | -- |
| 21.92 | 0.218 | 10.4 | -0.677 | 0.353 | -1.45 | -- | 0.679 | -0.0306 | 6.6 | 28.6 | 671 | -- | -- |
| 22.37 | 0.22 | 10.4 | -0.553 | 0.318 | -1.46 | -- | -- | -0.00485 | 6.94 | 28.21 | 711 | -- | -- |
| 22.58 | 0.221 | 10.4 | -0.752 | -- | -1.4 | -- | 0.935 | 0.0191 | -- | 36.97 | 1173 | -- | -- |
| 52.76 | 0.341 | 10.3 | -0.132 | 0.171 | -- | 0.282 | -- | 0.312 | 2.94 | -- | -- | -- | -- |
| 52.91 | 0.341 | 10.3 | -0.138 | 0.174 | -- | -- | -- | 0.31 | 1.93 | -- | -- | -- | -- |
| 22.87 | 0.223 | 10.4 | -0.556 | -- | -1.38 | -- | -- | 0.0433 | -- | 30.99 | 1219 | -- | -- |
| 29.22 | 0.252 | 10.4 | -- | 0.33 | -1.23 | -- | -- | 0.101 | 6 | 27.98 | 604 | -- | -- |
| 54.73 | 0.346 | 10.3 | -0.131 | -- | -- | -- | -- | 0.314 | -- | -- | -- | -- | -- |
| 53.42 | 0.342 | 10.3 | -- | 0.171 | -- | -- | -- | 0.326 | 1.9 | -- | -- | -- | -- |
| 29.96 | 0.255 | 10.4 | -- | -- | -1.16 | -- | -- | 0.136 | -- | 31.2 | 1155 | -- | -- |
| 55.19 | 0.347 | 10.3 | -- | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 21 |
| 3 | 20.78 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 4 | 20.78 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 8 | 20.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 25 | 21.09 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 27 | 21.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 28 | 21.13 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 35 | 21.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 38 | 21.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 43 | 21.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 58 | 21.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 67 | 21.69 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 76 | 21.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 82 | 21.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 83 | 21.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 84 | 21.82 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 86 | 21.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 18 |
| 89 | 21.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 98 | 21.88 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 101 | 21.90 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 132 | 21.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 143 | 22.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 159 | 22.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 184 | 22.14 | temperature | 25 | 1440 | < th | dose independent | sin | 19 | NA |
| 193 | 22.16 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 195 | 22.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 202 | 22.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 204 | 22.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 222 | 22.21 | temperature | 10 | 1440 | > th | dose dependent | sin | 16 | NA |
| 277 | 22.27 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 280 | 22.28 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 11 |
| 299 | 22.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 302 | 22.30 | temperature | 25 | 1440 | > th | dose independent | sin | 19 | NA |
| 343 | 22.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 464 | 22.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 6 |