Os03g0358000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PWWP domain containing protein.
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Os03g0358000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PWWP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.98 | 0.433 | 6.91 | 0.723 | 0.58 | 1.11 | 0.41 | -2.49 | 0.0031 | 8.4 | 25.62 | 263 | -- | -- |
| 93.37 | 0.45 | 6.94 | 0.362 | 0.659 | 1.37 | 0.334 | -- | -0.0636 | 8.38 | 24.52 | 203 | -- | -- |
| 85.38 | 0.43 | 6.9 | 0.701 | 0.611 | 1.13 | -- | -2.34 | -0.00164 | 8.39 | 25.56 | 241 | -- | -- |
| 92.76 | 0.449 | 6.97 | 0.337 | 0.681 | 1.55 | -- | -- | -0.16 | 8.55 | 22.89 | 166 | -- | -- |
| 97.34 | 0.46 | 6.9 | 0.99 | -- | 1.64 | -- | -3.89 | 0.0487 | -- | 35.67 | 482 | -- | -- |
| 119.02 | 0.511 | 7.01 | -0.0161 | 0.682 | -- | 0.282 | -- | -0.357 | 7.58 | -- | -- | -- | -- |
| 119.25 | 0.511 | 7.01 | -0.00944 | 0.683 | -- | -- | -- | -0.358 | 7.55 | -- | -- | -- | -- |
| 107.16 | 0.482 | 6.96 | 0.37 | -- | 1.46 | -- | -- | -0.0505 | -- | 29.31 | 482 | -- | -- |
| 94.93 | 0.454 | 6.98 | -- | 0.703 | 1.38 | -- | -- | -0.206 | 8.5 | 23 | 109 | -- | -- |
| 144.21 | 0.561 | 7.03 | 0.000519 | -- | -- | -- | -- | -0.347 | -- | -- | -- | -- | -- |
| 119.25 | 0.511 | 7.01 | -- | 0.682 | -- | -- | -- | -0.357 | 7.55 | -- | -- | -- | -- |
| 110.42 | 0.489 | 6.98 | -- | -- | 1.35 | -- | -- | -0.125 | -- | 30.07 | 482 | -- | -- |
| 144.21 | 0.561 | 7.03 | -- | -- | -- | -- | -- | -0.347 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.02 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 4 | 83.03 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 23 | 83.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 30 | 83.68 | humidity | 90 | 14400 | > th | dose dependent | sin | 4 | NA |
| 46 | 84.18 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 48 | 84.21 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 59 | 84.43 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 12 |
| 74 | 84.63 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 100 | 85.00 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 12 |
| 102 | 85.00 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 136 | 85.27 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |
| 137 | 85.27 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 190 | 85.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 10 | 21 |
| 210 | 85.77 | humidity | 90 | 14400 | < th | dose independent | sin | 7 | NA |
| 213 | 85.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 264 | 85.96 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 269 | 85.97 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 292 | 86.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 346 | 86.33 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 368 | 86.46 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 384 | 86.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 389 | 86.60 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 396 | 86.64 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 469 | 87.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 476 | 87.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 548 | 87.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 559 | 87.35 | humidity | 90 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 586 | 87.47 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 22 |
| 601 | 87.53 | humidity | 70 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 617 | 87.59 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 671 | 87.81 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 710 | 87.92 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 714 | 87.94 | humidity | 50 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 729 | 87.96 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 747 | 88.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 750 | 88.02 | humidity | 50 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 775 | 88.07 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 779 | 88.09 | humidity | 70 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 816 | 88.19 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 819 | 88.20 | humidity | 90 | 14400 | < th | dose independent | rect. | 11 | 20 |
| 826 | 88.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 884 | 88.35 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 889 | 88.36 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 23 |
| 938 | 88.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 15 |
| 943 | 88.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 15 |