Os03g0355200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os03g0355200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.6 | 0.247 | 10.4 | 1.16 | 0.0645 | 1.03 | 0.309 | 0.575 | 0.41 | 0.676 | 80.02 | 1414 | -- | -- |
| 27.89 | 0.246 | 10.4 | 1.21 | 0.0563 | 1.06 | 0.32 | -- | 0.416 | 0.374 | 81 | 1414 | -- | -- |
| 27.95 | 0.246 | 10.4 | 1.15 | 0.0817 | 1.02 | -- | 0.589 | 0.409 | 2.25 | 80.18 | 1400 | -- | -- |
| 28.26 | 0.248 | 10.4 | 1.2 | 0.0756 | 1.06 | -- | -- | 0.417 | 2.12 | 80.45 | 1402 | -- | -- |
| 28.16 | 0.247 | 10.4 | 1.15 | -- | 1.03 | -- | 0.612 | 0.409 | -- | 80.29 | 1467 | -- | -- |
| 41.87 | 0.303 | 10.4 | 1.19 | 0.0494 | -- | 0.275 | -- | 0.354 | 22.4 | -- | -- | -- | -- |
| 42.15 | 0.304 | 10.4 | 1.18 | 0.0519 | -- | -- | -- | 0.353 | 0.175 | -- | -- | -- | -- |
| 28.43 | 0.248 | 10.4 | 1.19 | -- | 1.07 | -- | -- | 0.414 | -- | 80.65 | 1467 | -- | -- |
| 61.46 | 0.365 | 10.4 | -- | 0.103 | 1.02 | -- | -- | 0.372 | 1.87 | 82 | 2744 | -- | -- |
| 42.32 | 0.304 | 10.4 | 1.18 | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
| 78.63 | 0.415 | 10.4 | -- | 0.07 | -- | -- | -- | 0.222 | 1.1 | -- | -- | -- | -- |
| 62.42 | 0.368 | 10.4 | -- | -- | 1.06 | -- | -- | 0.396 | -- | 83 | 2868 | -- | -- |
| 78.94 | 0.415 | 10.4 | -- | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.09 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 16 |
| 10 | 27.20 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 15 |
| 86 | 27.48 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 14 |
| 98 | 27.51 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 145 | 27.66 | humidity | 80 | 1440 | > th | dose independent | sin | 22 | NA |
| 146 | 27.66 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 154 | 27.67 | humidity | 80 | 1440 | < th | dose independent | sin | 22 | NA |
| 159 | 27.68 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 178 | 27.73 | humidity | 80 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 199 | 27.80 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 203 | 27.81 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 229 | 27.90 | humidity | 70 | 1440 | > th | dose dependent | sin | 22 | NA |
| 244 | 27.94 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 369 | 28.28 | humidity | 60 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 419 | 28.36 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 426 | 28.36 | humidity | 60 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 489 | 28.52 | humidity | 60 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 707 | 28.86 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 718 | 28.88 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 858 | 29.10 | humidity | 90 | 1440 | < th | dose dependent | rect. | 10 | 22 |
| 872 | 29.12 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 873 | 29.13 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 882 | 29.13 | humidity | 90 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 933 | 29.21 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 951 | 29.22 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 957 | 29.22 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 958 | 29.23 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 959 | 29.23 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 972 | 29.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 976 | 29.24 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 988 | 29.24 | humidity | 90 | 1440 | < th | dose dependent | rect. | 23 | 23 |