Os03g0351300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 14 protein.
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Os03g0351300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase, family 14 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154 | 0.583 | 11.8 | 1.71 | 2.4 | -6.06 | -2 | 1.32 | 0.595 | 0.404 | 10.54 | 94 | 12.3 | -- |
| 154.43 | 0.579 | 11.8 | 1.65 | 2.21 | -5.75 | -2.11 | -- | 0.545 | 0.86 | 11.18 | 112 | 12.7 | -- |
| 169.58 | 0.607 | 11.8 | 1.79 | 2.51 | -5.49 | -- | 1.51 | 0.594 | 1.27 | 12.8 | 116 | 12.4 | -- |
| 172.39 | 0.612 | 11.8 | 1.68 | 2.56 | -5.47 | -- | -- | 0.576 | 1.16 | 11.92 | 124 | 12.4 | -- |
| 179.03 | 0.623 | 11.7 | 1.81 | -- | -6.86 | -- | 3.51 | 0.612 | -- | 6.045 | 180 | 15.2 | -- |
| 312.13 | 0.828 | 11.7 | 1.05 | 5.36 | -- | -1.05 | -- | 0.231 | 4.19 | -- | -- | -- | -- |
| 315.18 | 0.831 | 11.7 | 1.06 | 5.35 | -- | -- | -- | 0.237 | 4.21 | -- | -- | -- | -- |
| 192.7 | 0.647 | 11.7 | 1.71 | -- | -6.73 | -- | -- | 0.549 | -- | 4.439 | 196 | 15.4 | -- |
| 241.53 | 0.724 | 11.8 | -- | 3.17 | -6.33 | -- | -- | 0.309 | 23.6 | 2.393 | 129 | 12.1 | -- |
| 1865.14 | 2.02 | 11.8 | 1.28 | -- | -- | -- | -- | 0.379 | -- | -- | -- | -- | -- |
| 344.82 | 0.869 | 11.8 | -- | 5.37 | -- | -- | -- | 0.119 | 4.21 | -- | -- | -- | -- |
| 258.51 | 0.749 | 11.8 | -- | -- | -6.46 | -- | -- | 0.312 | -- | -1.932 | 292 | 16.3 | -- |
| 1908.04 | 2.04 | 11.8 | -- | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 12 |
| 10 | 154.44 | temperature | 10 | 90 | > th | dose dependent | sin | 18 | NA |
| 14 | 155.35 | temperature | 10 | 270 | > th | dose dependent | sin | 20 | NA |
| 21 | 156.56 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 50 | 161.83 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 21 |
| 73 | 164.63 | temperature | 30 | 90 | < th | dose dependent | sin | 18 | NA |
| 89 | 166.52 | temperature | 30 | 10 | < th | dose dependent | sin | 17 | NA |
| 151 | 170.55 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 22 |
| 229 | 176.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 343 | 181.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 9 |
| 375 | 182.51 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 10 |
| 379 | 182.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 12 |
| 385 | 182.75 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 14 |
| 436 | 184.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 18 |
| 547 | 188.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 698 | 191.17 | temperature | 25 | 90 | > th | dose independent | rect. | 12 | 9 |
| 836 | 194.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 14 |
| 837 | 194.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 840 | 194.41 | temperature | 30 | 270 | < th | dose independent | sin | 21 | NA |
| 921 | 196.29 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 963 | 196.86 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 997 | 197.53 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 19 |