BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0351300 Os03g0351300|Os03g0351300
(524 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18670.1 | chr5:6226138-6227999 FORWARD LENGTH=537 296 2e-80
AT4G17090.1 | chr4:9605266-9607250 REVERSE LENGTH=549 215 6e-56
AT3G23920.1 | chr3:8641722-8644199 FORWARD LENGTH=576 211 1e-54
AT5G55700.1 | chr5:22551873-22554702 FORWARD LENGTH=532 164 1e-40
AT4G00490.1 | chr4:222422-224862 FORWARD LENGTH=543 161 8e-40
AT4G15210.1 | chr4:8666734-8669357 REVERSE LENGTH=499 151 1e-36
AT2G45880.1 | chr2:18878674-18881824 REVERSE LENGTH=692 147 1e-35
AT2G32290.1 | chr2:13714643-13716906 REVERSE LENGTH=578 146 3e-35
AT5G45300.1 | chr5:18353636-18356696 FORWARD LENGTH=690 141 9e-34
>AT5G18670.1 | chr5:6226138-6227999 FORWARD LENGTH=537
Length = 536
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/460 (40%), Positives = 246/460 (53%), Gaps = 36/460 (7%)
Query: 84 RLFVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQPGPTGDELGWA 143
+LFVGLP D V+ D VN KA++AGL+ALKLLGV+G+ELP+ W V + G + W+
Sbjct: 88 KLFVGLPLDTVS-DCNNVNHLKAITAGLKALKLLGVEGIELPIFWGVVEKEAAG-KYEWS 145
Query: 144 GYLAVAAMVRDAGLCLRVSLDTHGSXXXXX-----XXXXXXXDPDILFADRSGNRRDGCL 198
GYLAVA +V+ GL L SL HGS +P I F DR G + CL
Sbjct: 146 GYLAVAEIVKKVGLKLHASLSFHGSKQTEIGLPDWVAKIGDAEPGIYFTDRYGQQYKDCL 205
Query: 199 SFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFLGSTVTDVTVSLGPNGELKXXXXXXXX 258
SFAVD++PVL GK+P++ Y F SF +AF D++G+T+T +T+ LGP+GELK
Sbjct: 206 SFAVDDVPVLDGKTPMEVYRGFCESFKSAFADYMGNTITGITLGLGPDGELK----YPSH 261
Query: 259 XXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPESSTFFRSPG 318
EFQCYD+HML+ LK +A + G PLWGL GPHDAP Y + P SS+ F S G
Sbjct: 262 QHNAKLSGAGEFQCYDKHMLSALKGYAESTGNPLWGLGGPHDAPAYDQQPNSSS-FFSDG 320
Query: 319 GSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVPL------PRSRPAE 372
GSWE+ YG FFLSWY+ L +H DRVL+ A F G V L K+PL RS P+E
Sbjct: 321 GSWESQYGDFFLSWYSSLLTSHADRVLSVASSAFSGIGVPLCGKLPLLHQWHKLRSHPSE 380
Query: 373 ATAGLHGG-----YGPVAEMFARRGCTVIASGMDGSXXXXXXXXX---------XXXXXX 418
TAG + Y +AE+FA+ C +I GMD S
Sbjct: 381 LTAGFYSSNGQDRYEAIAEIFAKNSCRMIIPGMDLSDEHQSPESLSSPESLLGHIKTSCK 440
Query: 419 EHGARLAGESASLAVXXXXXXXXXXXXXXXXXERTRPCHFTYQRMGAEFFSPDHWPLFVQ 478
+ G ++G+++S V E FTYQRMGA FFSP+H+ F
Sbjct: 441 KQGVVVSGQNSSTPV----PGGFERIVENLKDENVGIDLFTYQRMGALFFSPEHFHAFTV 496
Query: 479 LVRAMECPEEAHEDDLPAAAGDGGRLAVPSGGRAAEDATA 518
VR + E + +D A + ++ SG A TA
Sbjct: 497 FVRNLSQFELSSDDQASEAEVEAETASIGSGTGAPSLQTA 536
>AT4G17090.1 | chr4:9605266-9607250 REVERSE LENGTH=549
Length = 548
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 201/431 (46%), Gaps = 38/431 (8%)
Query: 85 LFVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWA-VTQPGPTGDELGWA 143
+FV LP D VT G +N+ +A++A L ALK GV+GV + W V + GP W
Sbjct: 88 VFVMLPLDTVTMSGH-LNKPRAMNASLMALKGAGVEGVMVDAWWGLVEKDGPMN--YNWE 144
Query: 144 GYLAVAAMVRDAGLCLRVSLDTHGSXXXXXXX----------XXXXXDPDILFADRSGNR 193
GY + MV+ GL L+V + H +PD+++ D+SG R
Sbjct: 145 GYAELIQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDKSGRR 204
Query: 194 RDGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFLGSTVTDVTVSLGPNGELKXXX 253
+S D +PVL G++P+Q Y F RSF F ++G + ++ V +GP GEL+
Sbjct: 205 NPEYISLGCDSVPVLRGRTPIQVYSDFMRSFRERFEGYIGGVIAEIQVGMGPCGELR-YP 263
Query: 254 XXXXXXXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPESSTF 313
EFQCYD++M + L+ +A + G+ WG SGPHDA Y PE + F
Sbjct: 264 SYPESNGTWRFPGIGEFQCYDKYMKSSLQAYAESIGKTNWGTSGPHDAGEYKNLPEDTEF 323
Query: 314 FRSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVP------LPR 367
FR G+W + YG FF+ WY+G+LL HGD++L++A+ +F G +LS KV R
Sbjct: 324 FRRD-GTWNSEYGKFFMEWYSGKLLEHGDQLLSSAKGIFQGSGAKLSGKVAGIHWHYNTR 382
Query: 368 SRPAEATAGL-----HGGYGPVAEMFARRGCTVIASGM---DGSXXXXXX------XXXX 413
S AE TAG H GY P+A+MF + G + + M DG
Sbjct: 383 SHAAELTAGYYNTRNHDGYLPIAKMFNKHGVVLNFTCMEMKDGEQPEHANCSPEGLVKQV 442
Query: 414 XXXXXEHGARLAGESASLAVXXXXXXXXXXXXXXXXXERTRPCHFTYQRMGAEFFSPDHW 473
+ G LAGE+A FTY RM F +W
Sbjct: 443 QNATRQAGTELAGENALERYDSSAFGQVVATNRSDSGNGLTA--FTYLRMNKRLFEGQNW 500
Query: 474 PLFVQLVRAME 484
V+ V+ M+
Sbjct: 501 QQLVEFVKNMK 511
>AT3G23920.1 | chr3:8641722-8644199 FORWARD LENGTH=576
Length = 575
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 192/434 (44%), Gaps = 38/434 (8%)
Query: 85 LFVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQPGPTGDELGWAG 144
+FV +P D VT G VNR KA+ A L+ALK GV+G+ + V W + + G W G
Sbjct: 108 VFVMMPLDSVTM-GNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGT-YNWGG 165
Query: 145 YLAVAAMVRDAGLCLRVSLDTHGSXXXXXXXXXX----------XXDPDILFADRSGNRR 194
Y + + + GL ++ + H DPD+ + D+ G R
Sbjct: 166 YNELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRN 225
Query: 195 DGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFLGSTVTDVTVSLGPNGELKXXXX 254
+S D LPVL G++P+Q Y F R+F F LG T+ ++ V +GP GEL+
Sbjct: 226 HEYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGETIVEIQVGMGPAGELRYPSY 285
Query: 255 XXXXXXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPESSTFF 314
FQCYD++ L+ LK A G+P WG +GP DA Y PE + FF
Sbjct: 286 PEQEGTWKFPGIGA-FQCYDKYSLSSLKAAAETYGKPEWGSTGPTDAGHYNNWPEDTQFF 344
Query: 315 RSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVP------LPRS 368
+ GG W + YG FFLSWY+ LL HG+R+L++A+ +F+ V++S K+ RS
Sbjct: 345 KKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHYGTRS 404
Query: 369 RPAEATAGLHG-----GYGPVAEMFARRGCTVIASGM---------DGSXXXXXXXXXXX 414
E TAG + GY P+A+M AR + + D
Sbjct: 405 HAPELTAGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVA 464
Query: 415 XXXXEHGARLAGESA-----SLAVXXXXXXXXXXXXXXXXXERTRPCHFTYQRMGAEFFS 469
LAGE+A A E C FTY RM E F
Sbjct: 465 LATLAAEVPLAGENALPRYDDYAHEQILKASALNLDQNNEGEPREMCAFTYLRMNPELFQ 524
Query: 470 PDHWPLFVQLVRAM 483
D+W FV V+ M
Sbjct: 525 ADNWGKFVAFVKKM 538
>AT5G55700.1 | chr5:22551873-22554702 FORWARD LENGTH=532
Length = 531
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 187/439 (42%), Gaps = 45/439 (10%)
Query: 85 LFVGLPSDVVTADGR---AVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQP-GPTGDEL 140
+FV +P D D + R KA++ L+ALKL GV G+ + V W + + P E
Sbjct: 94 VFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPL--EF 151
Query: 141 GWAGYLAVAAMVRDAGLCLRVSLDTH----------GSXXXXXXXXXXXXDPDILFADRS 190
W+ Y + ++ +AGL L V+L H G + DI + D+S
Sbjct: 152 KWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKS 211
Query: 191 GNRRDGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFLGSTVTDVTVSLGPNGELK 250
G + L+ VD+LP+ GG++ +Q YE F SF+ F +LG+ + ++++ LGP+GEL+
Sbjct: 212 GFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEISIGLGPSGELR 271
Query: 251 XXXXXXXXXXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPES 310
EFQC+D++M+ L A G+P WG P + Y P
Sbjct: 272 YPAHPSGDGRWKFPGIG-EFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSG 330
Query: 311 STFFRSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVF------DGEPVELSAKV- 363
FF S+ + YG FFL WY+G+L+ H D +LA A V + V L AK+
Sbjct: 331 VPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIG 390
Query: 364 -----PLPRSRPAEATAG-----LHGGYGPVAEMFARRGCTVIASGMDGSXXXXXXXX-- 411
S PAE TAG L GY PVA + +R G + +D +
Sbjct: 391 GIYWWYKTSSHPAELTAGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYLC 450
Query: 412 -------XXXXXXXEHGARLAGESASLAVXXXXXXXXXXXXXXXXXERTRPCHFTYQRMG 464
+ + G + S + R FT+ RM
Sbjct: 451 SPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIRENCVQPNGDTLRS--FTFCRMN 508
Query: 465 AEFFSPDHWPLFVQLVRAM 483
+ F ++W FV +R M
Sbjct: 509 EKIFRVENWNNFVPFIRQM 527
>AT4G00490.1 | chr4:222422-224862 FORWARD LENGTH=543
Length = 542
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 157/328 (47%), Gaps = 30/328 (9%)
Query: 85 LFVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQPGPTGDELGWAG 144
++V LP V+ + V + + LR LK + VDGV + W + + T W+G
Sbjct: 97 VYVMLPLGVIDMNSEVVEPEELLDQ-LRTLKSVNVDGVMVDCWWGIVE-SHTPQVYNWSG 154
Query: 145 YLAVAAMVRDAGLCLRVSLDTHGS----------XXXXXXXXXXXXDPDILFADRSGNRR 194
Y + M+R+ GL ++V + H +PDI F D +G R
Sbjct: 155 YKKLFQMIRELGLKIQVVMSFHECGGNVGDDVHIQIPEWVREIGQSNPDIYFTDSAGRRN 214
Query: 195 DGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFLGSTVT-DVTVSLGPNGELKXXX 253
CL++ +D+ VL G++ L+ Y + RSF F +F + ++ V LGP GEL+
Sbjct: 215 TECLTWGIDKQRVLRGRTALEVYFDYMRSFRVEFDEFFEEKIIPEIEVGLGPCGELRYPS 274
Query: 254 XXXXXXXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPESSTF 313
EFQCYD++++ LK A G WG GP + Y +P + F
Sbjct: 275 YPAQFGWKYPGIG--EFQCYDKYLMNSLKEAAEVRGHSFWG-RGPDNTETYNSTPHGTGF 331
Query: 314 FRSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVP------LPR 367
FR GG +++ YG FFL+WY+ L+ HGDRVLA A F+G + +AK+
Sbjct: 332 FRD-GGDYDSYYGRFFLNWYSRVLIDHGDRVLAMANLAFEGTCI--AAKLSGIHWWYKTA 388
Query: 368 SRPAEATAGLHG-----GYGPVAEMFAR 390
S AE TAG + GYGP+A MF +
Sbjct: 389 SHAAELTAGFYNSSNRDGYGPIAAMFKK 416
>AT4G15210.1 | chr4:8666734-8669357 REVERSE LENGTH=499
Length = 498
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 181/441 (41%), Gaps = 44/441 (9%)
Query: 85 LFVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQ-PGPTGDELGWA 143
++V LP VV + + + R + GVDGV + V W + + GP + W
Sbjct: 16 VYVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIESKGPK--QYDWT 73
Query: 144 GYLAVAAMVRDAGLCLRVSLDTHGSXXXXXXXXXX----------XXDPDILFADRSGNR 193
Y + ++ GL ++ + H DPDI + +R G R
Sbjct: 74 AYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPDIYYTNRKGTR 133
Query: 194 RDGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFL-GSTVTDVTVSLGPNGELKXX 252
LS VD LP+ G++ +Q Y + SF D + + D+ V LGP GEL+
Sbjct: 134 DIEYLSIGVDNLPLFAGRTAVQLYSDYMSSFKENMADLIEAGVIVDIEVGLGPAGELRYP 193
Query: 253 XXXXXXXXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPESST 312
EFQCYD+++ K A AG P W L P DA Y + PE +
Sbjct: 194 SYPQSQGWVFPGIG--EFQCYDKYLKKDFKEAAAKAGHPEWDL--PEDAGEYNDKPEETG 249
Query: 313 FFRSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVP------LP 366
FF+ G++ + G FF++WY+ +L+ HGD++L A ++F G V L+AKV
Sbjct: 250 FFKK-DGTYVSEKGKFFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNH 308
Query: 367 RSRPAEATAGLHG-----GYGPVAEMFARRGCTVIASGMDGSXXXXXXX---------XX 412
S AE TAG + GY P+A M ++ + + ++
Sbjct: 309 HSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQE 368
Query: 413 XXXXXXEHGARLAGESA-----SLAVXXXXXXXXXXXXXXXXXERTRPCHFTYQRMGAEF 467
+ G +AGE+A + + R FTY R+
Sbjct: 369 VLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNGVNPNGKPKLRMYGFTYLRLSDTV 428
Query: 468 FSPDHWPLFVQLVRAMECPEE 488
F +++ LF +LVR M ++
Sbjct: 429 FQENNFELFKKLVRKMHADQD 449
>AT2G45880.1 | chr2:18878674-18881824 REVERSE LENGTH=692
Length = 691
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 153/333 (45%), Gaps = 30/333 (9%)
Query: 85 LFVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQPGPTGDELGWAG 144
++V LP V+ +R + LR LK + VDGV++ W + + G + E W G
Sbjct: 250 VYVMLPLGVINMKCELADR-DGLLKHLRILKSIHVDGVKVDCWWGIVE-GHSPQEYNWTG 307
Query: 145 YLAVAAMVRDAGLCLRVSLDTHGSXXXXX----------XXXXXXXDPDILFADRSGNRR 194
Y + MVRD L ++V + H +PDI F DR G R
Sbjct: 308 YRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLPHWVAEIGRTNPDIYFTDREGRRN 367
Query: 195 DGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFL-GSTVTDVTVSLGPNGELKXXX 253
CLS+ +D+ +L G++ L+ Y + RSF +FL ++ V + LGP GEL+
Sbjct: 368 PECLSWGIDKERILRGRTALEVYFDYMRSFRIELAEFLEDGVISMVEIGLGPCGELR--Y 425
Query: 254 XXXXXXXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPESSTF 313
EFQCYD+++ L++ A + G W GP + Y P+ + F
Sbjct: 426 PSCPIKHGWRYPGVGEFQCYDKYLSKSLRKAAESRGHLFWA-RGPDNTGSYNSQPQGTGF 484
Query: 314 FRSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVP------LPR 367
F GG ++ YG FFL WY+ L+ H D++L A+ VFD + +AK+P
Sbjct: 485 F-CDGGDYDGLYGRFFLKWYSQVLIDHADQILCLAKLVFDSSCI--AAKLPDVHWWYRTA 541
Query: 368 SRPAEATAGLHG-----GYGPVAEMFARRGCTV 395
S AE TAG + GY +A + G T+
Sbjct: 542 SHAAELTAGFYNPSNRDGYSAIASTLKKHGATL 574
>AT2G32290.1 | chr2:13714643-13716906 REVERSE LENGTH=578
Length = 577
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 155/329 (47%), Gaps = 30/329 (9%)
Query: 85 LFVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQ-PGPTGDELGWA 143
++V L V+T D N +++ L+ LK VDGV + V W + + GP + W+
Sbjct: 80 VYVMLQLGVITNDNVLENE-ESLKKQLKKLKQSQVDGVMVDVWWGIVESKGPK--QYQWS 136
Query: 144 GYLAVAAMVRDAGLCLRVSLDTH----------GSXXXXXXXXXXXXDPDILFADRSGNR 193
Y + A+V+ GL L+ + H +PDI + ++SGNR
Sbjct: 137 AYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIPKWVLEIGDSNPDIFYTNKSGNR 196
Query: 194 RDGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHDFLGS-TVTDVTVSLGPNGELKXX 252
CLS +VD L + G++ ++ Y + +SF DF+ S + D+ V LGP GEL+
Sbjct: 197 NKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDIEVGLGPAGELRYP 256
Query: 253 XXXXXXXXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPESST 312
EFQCYD+++ + + G P W L P +A Y P +
Sbjct: 257 SYSETQGWVFPGIG--EFQCYDKYLRSDYEEEVRRIGHPEWKL--PENAGEYNSVPGETE 312
Query: 313 FFRSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVP------LP 366
FF G++ G FFLSWY+ +LL HGD++L A +VF G ++++AKV
Sbjct: 313 FFEYSNGTYLKEEGNFFLSWYSKKLLLHGDQILDEANKVFLGCKLKIAAKVSGIHWWYKT 372
Query: 367 RSRPAEATAGLHG-----GYGPVAEMFAR 390
S AE TAG + GY +A++ R
Sbjct: 373 ESHAAELTAGYYNLKNRDGYRAIAKIMRR 401
>AT5G45300.1 | chr5:18353636-18356696 FORWARD LENGTH=690
Length = 689
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 155/333 (46%), Gaps = 30/333 (9%)
Query: 85 LFVGLPSDVVTADGRAVNRGKAVSAGLRALKLLGVDGVELPVSWAVTQPGPTGDELGWAG 144
++ LP ++ G+ V+ + V L +K L VDGV + W + + G + W+G
Sbjct: 257 VYAMLPVGIIDNFGQLVD-PEGVRQELSYMKSLNVDGVVIDCWWGIVE-GWNPQKYVWSG 314
Query: 145 YLAVAAMVRDAGLCLRVSLDTHGSXXXXXXXXXXXX----------DPDILFADRSGNRR 194
Y + ++RD L L+V + H +PDI F DR G R
Sbjct: 315 YRELFNLIRDFKLKLQVVMAFHEYGGNASGNVMISLPQWVLKIGKDNPDIFFTDREGRRS 374
Query: 195 DGCLSFAVDELPVLGGKSPLQAYEAFFRSFAAAFHD-FLGSTVTDVTVSLGPNGELKXXX 253
CL++++D+ VL G++ ++ Y F RSF + F D F+ +T V + LG +GELK
Sbjct: 375 FECLNWSIDKERVLHGRTGIEVYFDFMRSFRSEFDDLFVEGLITAVEIGLGASGELK--Y 432
Query: 254 XXXXXXXXXXXXXXXEFQCYDRHMLARLKRHAVAAGQPLWGLSGPHDAPRYGESPESSTF 313
EFQCYD++ L++ A + G WG GP +A +Y P + F
Sbjct: 433 PSFPERMGWIYPGIGEFQCYDKYSQLSLQKEAKSRGFTFWG-KGPENAGQYSSHPHETVF 491
Query: 314 FRSPGGSWETAYGGFFLSWYAGELLAHGDRVLAAARRVFDGEPVELSAKVPL------PR 367
F+ G +++ YG FFL+WY+ L+ H + VL+ A F E ++ K+P
Sbjct: 492 FQE-RGEYDSYYGRFFLNWYSQLLIGHAENVLSLANLAF--EETKIIVKIPAIYWSYKTA 548
Query: 368 SRPAEATAGLHG-----GYGPVAEMFARRGCTV 395
S AE TAG + GY V E + TV
Sbjct: 549 SHAAELTAGYYNPSNRDGYSLVFETLKKYSVTV 581
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,117,721
Number of extensions: 344883
Number of successful extensions: 642
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 601
Number of HSP's successfully gapped: 9
Length of query: 524
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 421
Effective length of database: 8,282,721
Effective search space: 3487025541
Effective search space used: 3487025541
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)