Os03g0347300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, CW-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0347300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, CW-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.78 | 0.314 | 8.89 | 1.22 | 0.493 | 0.118 | 0.334 | 2.07 | 0.123 | 10.9 | 0.1931 | 4522 | -- | -- |
| 44.97 | 0.312 | 8.92 | 1.22 | 0.443 | 0.478 | 0.4 | -- | 0.134 | 11.4 | 0.7447 | 21589 | -- | -- |
| 45.22 | 0.313 | 8.89 | 1.23 | 0.493 | 0.114 | -- | 2.05 | 0.127 | 10.7 | 0.2071 | 4524 | -- | -- |
| 43.26 | 0.306 | 8.92 | 0.905 | 0.482 | 0.633 | -- | -- | 0.171 | 10.5 | 1.001 | 31855 | -- | -- |
| 60.09 | 0.361 | 8.9 | 1.24 | -- | 0.107 | -- | 2.04 | 0.117 | -- | 0.1122 | 4360 | -- | -- |
| 52.89 | 0.341 | 8.94 | 1.36 | 0.483 | -- | 0.275 | -- | 0.0948 | 10.7 | -- | -- | -- | -- |
| 53.19 | 0.342 | 8.94 | 1.37 | 0.482 | -- | -- | -- | 0.0953 | 10.6 | -- | -- | -- | -- |
| 57.27 | 0.352 | 8.93 | 0.869 | -- | 0.628 | -- | -- | 0.169 | -- | 1 | 33242 | -- | -- |
| 54.61 | 0.344 | 8.92 | -- | 0.466 | 0.912 | -- | -- | 0.154 | 10.4 | 1.274 | 47220 | -- | -- |
| 67.53 | 0.384 | 8.95 | 1.36 | -- | -- | -- | -- | 0.0929 | -- | -- | -- | -- | -- |
| 102.48 | 0.474 | 8.97 | -- | 0.474 | -- | -- | -- | -0.057 | 10.4 | -- | -- | -- | -- |
| 68 | 0.384 | 8.93 | -- | -- | 0.917 | -- | -- | 0.168 | -- | 1.334 | 47520 | -- | -- |
| 116.21 | 0.503 | 8.98 | -- | -- | -- | -- | -- | -0.0579 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.19 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 3 | 43.21 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 4 | 43.27 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 5 | 43.34 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 9 | 43.50 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 16 | 43.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 22 | 43.77 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 27 | 43.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 36 | 44.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 37 | 44.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 41 | 44.05 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 49 | 44.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 53 | 44.17 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 58 | 44.20 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 16 |
| 59 | 44.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 70 | 44.24 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 75 | 44.25 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 87 | 44.28 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 88 | 44.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 90 | 44.29 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 16 |
| 108 | 44.34 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 132 | 44.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 138 | 44.41 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 141 | 44.41 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 6 | 23 |
| 150 | 44.41 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 159 | 44.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 171 | 44.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 11 |
| 202 | 44.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 205 | 44.49 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 211 | 44.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 220 | 44.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 232 | 44.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 10 |
| 238 | 44.52 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 239 | 44.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 243 | 44.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 250 | 44.53 | wind | 5.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 268 | 44.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 278 | 44.55 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 15 |
| 300 | 44.56 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 301 | 44.57 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 336 | 44.59 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 337 | 44.59 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 350 | 44.59 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 12 |
| 409 | 44.63 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 421 | 44.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 8 |
| 434 | 44.64 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 450 | 44.65 | wind | 3.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 460 | 44.65 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 16 | NA |
| 477 | 44.66 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 479 | 44.66 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 514 | 44.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 526 | 44.68 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 15 | 18 |
| 529 | 44.69 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 579 | 44.71 | wind | 3.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 614 | 44.72 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 657 | 44.73 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 18 |
| 673 | 44.74 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 12 |
| 703 | 44.75 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 11 | 22 |
| 707 | 44.76 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 726 | 44.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 20 |
| 754 | 44.77 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 14 | 23 |
| 759 | 44.78 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 11 |
| 760 | 44.78 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 11 |
| 763 | 44.78 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 791 | 44.79 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 845 | 44.81 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 864 | 44.81 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 21 |
| 873 | 44.81 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 20 | 23 |
| 905 | 44.83 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 914 | 44.83 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 917 | 44.83 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 959 | 44.84 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 982 | 44.85 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 17 | 5 |