Os03g0341600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0341600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 210.06 | 0.681 | 10.5 | 0.228 | 0.609 | -0.0855 | 0.363 | 5.2 | -0.606 | 11.1 | 25.39 | 1509 | -- | -- |
| 214.6 | 0.682 | 10.7 | -1.76 | 0.585 | 0.746 | 0.245 | -- | -1.2 | 11 | 30.7 | 47520 | -- | -- |
| 210.43 | 0.676 | 10.5 | 0.277 | 0.604 | -0.122 | -- | 5.37 | -0.607 | 11.2 | 25.9 | 1474 | -- | -- |
| 214.84 | 0.683 | 10.7 | -1.71 | 0.601 | 0.707 | -- | -- | -1.2 | 10.9 | 30.9 | 47520 | -- | -- |
| 233.28 | 0.711 | 10.5 | 0.307 | -- | -0.158 | -- | 5.7 | -0.593 | -- | 25.45 | 1583 | -- | -- |
| 227.61 | 0.707 | 10.6 | -1.04 | 0.587 | -- | 0.299 | -- | -0.91 | 10.8 | -- | -- | -- | -- |
| 227.96 | 0.707 | 10.6 | -1.03 | 0.584 | -- | -- | -- | -0.908 | 10.9 | -- | -- | -- | -- |
| 236.22 | 0.716 | 10.7 | -1.63 | -- | 0.688 | -- | -- | -1.14 | -- | 29.5 | 44673 | -- | -- |
| 245.36 | 0.73 | 10.6 | -- | 0.579 | -0.521 | -- | -- | -0.638 | 10.9 | 3.992 | 47520 | -- | -- |
| 249.16 | 0.738 | 10.7 | -1.04 | -- | -- | -- | -- | -0.912 | -- | -- | -- | -- | -- |
| 255.84 | 0.748 | 10.6 | -- | 0.593 | -- | -- | -- | -0.794 | 11 | -- | -- | -- | -- |
| 266.12 | 0.76 | 10.6 | -- | -- | -0.548 | -- | -- | -0.632 | -- | 4.521 | 47520 | -- | -- |
| 277.75 | 0.778 | 10.6 | -- | -- | -- | -- | -- | -0.797 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 205.99 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 7 | 206.91 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 11 | 207.07 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 31 | 208.10 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 37 | 208.17 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 43 | 208.35 | wind | 5.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 55 | 208.55 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 58 | 208.57 | wind | 5.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 63 | 208.63 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 78 | 208.84 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 91 | 208.94 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 92 | 208.94 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 6 |
| 98 | 208.96 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 102 | 208.97 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 12 | 12 |
| 113 | 209.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 116 | 209.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 120 | 209.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 123 | 209.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 157 | 209.20 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 184 | 209.34 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 187 | 209.35 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 10 | 8 |
| 189 | 209.35 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 4 | 12 |
| 192 | 209.36 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 199 | 209.37 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 211 | 209.39 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 212 | 209.39 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 229 | 209.42 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 236 | 209.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 288 | 209.57 | radiation | 40.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 289 | 209.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 312 | 209.64 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 337 | 209.70 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 340 | 209.72 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 359 | 209.78 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 397 | 209.86 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 404 | 209.88 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 454 | 209.97 | wind | 1.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 504 | 210.07 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 506 | 210.07 | wind | 1.0 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 514 | 210.08 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 522 | 210.10 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 546 | 210.14 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 566 | 210.18 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 567 | 210.18 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 574 | 210.19 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 4 |
| 597 | 210.25 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 598 | 210.25 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 602 | 210.25 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 20 |
| 611 | 210.27 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 626 | 210.29 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 633 | 210.32 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 637 | 210.33 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 640 | 210.35 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 684 | 210.43 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 740 | 210.50 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 759 | 210.52 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 775 | 210.56 | wind | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 790 | 210.58 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 850 | 210.68 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 859 | 210.69 | wind | 1.0 | 90 | < th | dose dependent | rect. | 10 | 2 |
| 864 | 210.70 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 883 | 210.72 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 2 | 9 |
| 899 | 210.74 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 900 | 210.74 | wind | 1.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 913 | 210.75 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 916 | 210.76 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 2 | 13 |
| 918 | 210.76 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 951 | 210.78 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 956 | 210.78 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 965 | 210.79 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 1 | 17 |
| 970 | 210.79 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 21 | 21 |
| 989 | 210.80 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 23 | 19 |