Os03g0336900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
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Os03g0336900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF623, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.02 | 0.479 | 10.4 | 0.959 | 0.828 | -1.5 | 0.806 | 0.347 | 0.00958 | 8.28 | 22.2 | 1452 | -- | -- |
| 104.28 | 0.476 | 10.4 | 0.854 | 0.826 | -1.51 | 0.836 | -- | -0.0135 | 8.18 | 22.2 | 1406 | -- | -- |
| 106 | 0.48 | 10.4 | 0.983 | 0.825 | -1.49 | -- | 0.348 | 0.00752 | 8.36 | 22.18 | 1439 | -- | -- |
| 106.28 | 0.48 | 10.4 | 0.867 | 0.824 | -1.5 | -- | -- | -0.0192 | 8.37 | 22.18 | 1439 | -- | -- |
| 126.88 | 0.525 | 10.5 | 0.927 | -- | -1.44 | -- | 0.379 | -0.00364 | -- | 22.22 | 770 | -- | -- |
| 186.29 | 0.64 | 10.6 | 0.298 | 0.822 | -- | 0.696 | -- | -0.513 | 8.57 | -- | -- | -- | -- |
| 187.82 | 0.642 | 10.6 | 0.321 | 0.819 | -- | -- | -- | -0.513 | 8.69 | -- | -- | -- | -- |
| 126.75 | 0.524 | 10.5 | 0.799 | -- | -1.45 | -- | -- | -0.0158 | -- | 22.3 | 800 | -- | -- |
| 123 | 0.517 | 10.5 | -- | 0.818 | -1.26 | -- | -- | -0.144 | 8.08 | 22.3 | 1262 | -- | -- |
| 225.69 | 0.702 | 10.6 | 0.323 | -- | -- | -- | -- | -0.506 | -- | -- | -- | -- | -- |
| 190.53 | 0.646 | 10.6 | -- | 0.82 | -- | -- | -- | -0.548 | 8.66 | -- | -- | -- | -- |
| 142.58 | 0.556 | 10.5 | -- | -- | -1.31 | -- | -- | -0.148 | -- | 22.23 | 779 | -- | -- |
| 228.44 | 0.705 | 10.6 | -- | -- | -- | -- | -- | -0.542 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 2 | 106.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 4 | 106.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 5 | 106.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 18 | 106.68 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 20 | 106.77 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 75 | 107.43 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 267 | 109.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 461 | 111.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 494 | 111.55 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 555 | 112.05 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 556 | 112.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 702 | 113.02 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 871 | 114.20 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 910 | 114.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 945 | 114.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |