Os03g0332700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ABC Transporter, ATP binding component.
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Os03g0332700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ABC Transporter, ATP binding component.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.09 | 0.488 | 9.54 | 0.111 | 0.689 | -0.825 | -0.724 | -5.58 | -0.509 | 4.67 | 0.9067 | 1410 | -- | -- |
| 122.95 | 0.516 | 9.66 | -0.553 | 0.731 | -0.395 | -0.743 | -- | -0.714 | 4.79 | 35.42 | 2598 | -- | -- |
| 109.42 | 0.487 | 9.54 | 0.109 | 0.685 | -0.8 | -- | -5.5 | -0.507 | 4.55 | 0.8981 | 1415 | -- | -- |
| 116.05 | 0.502 | 9.67 | -0.514 | 0.764 | -0.623 | -- | -- | -0.803 | 4.55 | 52.16 | 10825 | -- | -- |
| 134.25 | 0.54 | 9.55 | 0.135 | -- | -0.985 | -- | -5.89 | -0.523 | -- | 0.85 | 1406 | -- | -- |
| 126.5 | 0.527 | 9.64 | -0.562 | 0.734 | -- | -0.435 | -- | -0.635 | 4.28 | -- | -- | -- | -- |
| 127 | 0.528 | 9.64 | -0.558 | 0.73 | -- | -- | -- | -0.633 | 4.16 | -- | -- | -- | -- |
| 123.44 | 0.517 | 9.61 | -0.447 | -- | 0.789 | -- | -- | -0.558 | -- | 0.05 | 536 | -- | -- |
| 121.52 | 0.513 | 9.66 | -- | 0.768 | -0.677 | -- | -- | -0.755 | 4.41 | 96.64 | 10728 | -- | -- |
| 155.86 | 0.583 | 9.64 | -0.528 | -- | -- | -- | -- | -0.613 | -- | -- | -- | -- | -- |
| 135.19 | 0.544 | 9.63 | -- | 0.719 | -- | -- | -- | -0.571 | 4.18 | -- | -- | -- | -- |
| 129.12 | 0.529 | 9.61 | -- | -- | 0.795 | -- | -- | -0.524 | -- | 5.93e-05 | 532 | -- | -- |
| 163.22 | 0.596 | 9.63 | -- | -- | -- | -- | -- | -0.555 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.21 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 2 | 102.26 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 3 | 102.37 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 4 | 102.54 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 9 | 103.07 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 12 | 103.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 15 | 103.35 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 16 | 103.36 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 21 | 103.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 23 | 103.54 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 25 | 103.55 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 32 | 103.58 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 33 | 103.59 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 43 | 103.76 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 46 | 103.88 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 50 | 104.01 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 59 | 104.21 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 62 | 104.27 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 69 | 104.29 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 101 | 104.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 102 | 104.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 109 | 104.74 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 110 | 104.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 218 | 105.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 219 | 105.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 223 | 105.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 14 |
| 225 | 105.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 227 | 105.62 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 240 | 105.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 17 |
| 242 | 105.67 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 252 | 105.71 | humidity | 60.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 264 | 105.73 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 276 | 105.77 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 310 | 105.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 344 | 105.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 429 | 106.06 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 440 | 106.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 498 | 106.12 | humidity | 60.0 | 14400 | > th | dose independent | no | NA | NA |
| 542 | 106.14 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 548 | 106.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 581 | 106.17 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 16 | NA |
| 594 | 106.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 598 | 106.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 602 | 106.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 690 | 106.29 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 11 |
| 693 | 106.30 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 712 | 106.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 719 | 106.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 13 |
| 721 | 106.33 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 735 | 106.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 13 |
| 758 | 106.36 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 773 | 106.37 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 0 | NA |
| 791 | 106.38 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 9 |
| 824 | 106.41 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 890 | 106.47 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 17 | NA |
| 893 | 106.47 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 17 | NA |
| 899 | 106.48 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 17 | NA |
| 988 | 106.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 996 | 106.55 | humidity | 70.0 | 14400 | < th | dose dependent | no | NA | NA |