Os03g0331900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0331900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.75 | 0.351 | 10.7 | -0.367 | 1.51 | 0.0125 | -0.0166 | 4.77 | -1.36 | 8.11 | 29.72 | 686 | -- | -- |
| 56.57 | 0.35 | 10.8 | -0.724 | 1.45 | 0.449 | -0.105 | -- | -1.38 | 8.17 | 30.16 | 657 | -- | -- |
| 55.75 | 0.348 | 10.7 | -0.355 | 1.51 | 0.00408 | -- | 4.84 | -1.36 | 8.11 | 29.6 | 687 | -- | -- |
| 56.29 | 0.349 | 10.7 | -0.772 | 1.51 | 0.542 | -- | -- | -1.37 | 8.11 | 29.76 | 651 | -- | -- |
| 143.88 | 0.559 | 10.7 | 0.0971 | -- | -1.07 | -- | 4.53 | -1.19 | -- | 24.81 | 653 | -- | -- |
| 62.1 | 0.369 | 10.8 | -0.693 | 1.37 | -- | -0.325 | -- | -1.41 | 8.2 | -- | -- | -- | -- |
| 62.43 | 0.37 | 10.8 | -0.703 | 1.37 | -- | -- | -- | -1.41 | 8.22 | -- | -- | -- | -- |
| 149.69 | 0.57 | 10.8 | -0.561 | -- | -0.759 | -- | -- | -1.32 | -- | 24.4 | 624 | -- | -- |
| 71.61 | 0.394 | 10.7 | -- | 1.48 | 0.437 | -- | -- | -1.29 | 8.13 | 30.19 | 602 | -- | -- |
| 166.04 | 0.602 | 10.8 | -0.693 | -- | -- | -- | -- | -1.39 | -- | -- | -- | -- | -- |
| 75.44 | 0.406 | 10.7 | -- | 1.37 | -- | -- | -- | -1.33 | 8.25 | -- | -- | -- | -- |
| 157.13 | 0.584 | 10.8 | -- | -- | -0.855 | -- | -- | -1.26 | -- | 24.39 | 628 | -- | -- |
| 178.7 | 0.624 | 10.8 | -- | -- | -- | -- | -- | -1.32 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.37 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 2 | 52.67 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 5 | 52.95 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 7 | 53.01 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 8 | 53.06 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 9 | 53.09 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 21 | 53.60 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 1 |
| 30 | 53.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 43 | 54.06 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 67 | 54.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 75 | 54.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 81 | 54.43 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 92 | 54.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 96 | 54.55 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 1 |
| 102 | 54.58 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 106 | 54.59 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 114 | 54.63 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 131 | 54.74 | humidity | 90 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 133 | 54.74 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 136 | 54.76 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 144 | 54.80 | temperature | 25 | 10 | > th | dose independent | rect. | 2 | 16 |
| 161 | 54.85 | temperature | 25 | 10 | > th | dose independent | rect. | 2 | 20 |
| 167 | 54.86 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 22 |
| 175 | 54.87 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 21 |
| 180 | 54.89 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 211 | 54.97 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 275 | 55.14 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 293 | 55.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 295 | 55.16 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 310 | 55.19 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 324 | 55.23 | temperature | 30 | 720 | > th | dose dependent | rect. | 12 | 3 |
| 337 | 55.25 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 346 | 55.27 | temperature | 25 | 10 | > th | dose independent | rect. | 2 | 9 |
| 358 | 55.29 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 2 |
| 359 | 55.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 368 | 55.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 444 | 55.40 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 22 |
| 448 | 55.41 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 13 |
| 451 | 55.41 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 10 |
| 479 | 55.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 502 | 55.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 519 | 55.49 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 21 |
| 521 | 55.49 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 529 | 55.51 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 5 |
| 536 | 55.52 | temperature | 30 | 720 | > th | dose dependent | sin | 3 | NA |
| 552 | 55.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 563 | 55.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 564 | 55.54 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 568 | 55.54 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 18 |
| 580 | 55.55 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 614 | 55.58 | temperature | 30 | 720 | > th | dose independent | rect. | 10 | 7 |
| 620 | 55.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 15 |
| 650 | 55.60 | temperature | 10 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 653 | 55.61 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 659 | 55.61 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 661 | 55.61 | temperature | 25 | 30 | > th | dose dependent | rect. | 18 | 12 |
| 667 | 55.62 | temperature | 30 | 720 | < th | dose independent | rect. | 22 | 14 |
| 684 | 55.62 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 701 | 55.64 | temperature | 25 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 732 | 55.67 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 23 |
| 734 | 55.67 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 739 | 55.67 | radiation | 1 | 720 | < th | dose dependent | rect. | 22 | 17 |
| 744 | 55.68 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 12 |
| 746 | 55.68 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 796 | 55.72 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 20 |
| 798 | 55.72 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 808 | 55.73 | temperature | 30 | 720 | > th | dose independent | sin | 0 | NA |
| 810 | 55.73 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 23 |
| 826 | 55.74 | temperature | 30 | 720 | > th | dose independent | rect. | 15 | 1 |
| 882 | 55.76 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 19 |
| 903 | 55.77 | temperature | 25 | 30 | > th | dose dependent | rect. | 18 | 8 |
| 930 | 55.79 | radiation | 1 | 1440 | < th | dose dependent | sin | 19 | NA |