Os03g0328400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Apyrase GS50 (Fragment).
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Os03g0328400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Apyrase GS50 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.37 | 0.271 | 9.88 | -0.61 | 1.05 | 0.592 | 0.15 | 0.933 | 0.186 | 3.97 | 0.1514 | 6729 | -- | -- |
| 33.71 | 0.27 | 9.88 | -0.435 | 1.06 | 0.525 | 0.278 | -- | 0.241 | 3.88 | 0.4068 | 16908 | -- | -- |
| 33.43 | 0.269 | 9.88 | -0.613 | 1.05 | 0.594 | -- | 0.938 | 0.186 | 3.95 | 0.1191 | 6728 | -- | -- |
| 33.85 | 0.271 | 9.88 | -0.446 | 1.06 | 0.535 | -- | -- | 0.246 | 3.93 | 0.001076 | 16908 | -- | -- |
| 93.42 | 0.45 | 9.88 | -0.578 | -- | 0.556 | -- | 1.1 | 0.203 | -- | 0.3538 | 6728 | -- | -- |
| 42.94 | 0.307 | 9.9 | -0.476 | 1.04 | -- | 0.24 | -- | 0.106 | 4 | -- | -- | -- | -- |
| 43.11 | 0.307 | 9.9 | -0.479 | 1.04 | -- | -- | -- | 0.105 | 3.98 | -- | -- | -- | -- |
| 94.65 | 0.453 | 9.88 | -0.384 | -- | 0.518 | -- | -- | 0.265 | -- | 0.3008 | 15375 | -- | -- |
| 38.78 | 0.29 | 9.86 | -- | 1.05 | 0.543 | -- | -- | 0.29 | 3.91 | 0.002238 | 16821 | -- | -- |
| 102.62 | 0.473 | 9.91 | -0.437 | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
| 49.17 | 0.328 | 9.89 | -- | 1.03 | -- | -- | -- | 0.158 | 3.99 | -- | -- | -- | -- |
| 98.49 | 0.462 | 9.87 | -- | -- | 0.557 | -- | -- | 0.317 | -- | 0.2924 | 15390 | -- | -- |
| 107.65 | 0.484 | 9.9 | -- | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.26 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 4 | 32.50 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 5 | 32.51 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 8 | 32.65 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 10 | 32.70 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 12 |
| 13 | 32.72 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 20 | 32.77 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 23 | 32.78 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 7 |
| 25 | 32.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 37 | 32.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 38 | 32.82 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 42 | 32.83 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 48 | 32.84 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 49 | 32.84 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 53 | 32.85 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 57 | 32.87 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 58 | 32.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 12 |
| 66 | 32.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 12 |
| 76 | 32.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 7 |
| 83 | 32.93 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 92 | 32.95 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 116 | 32.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 7 |
| 119 | 32.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 7 |
| 123 | 33.00 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 125 | 33.00 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 126 | 33.00 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 127 | 33.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 9 |
| 128 | 33.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 19 |
| 134 | 33.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 9 |
| 136 | 33.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 19 |
| 138 | 33.01 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 139 | 33.01 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 142 | 33.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 19 |
| 160 | 33.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 16 |
| 163 | 33.04 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 173 | 33.05 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 175 | 33.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 183 | 33.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 16 |
| 198 | 33.07 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 265 | 33.11 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 334 | 33.16 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 398 | 33.21 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 409 | 33.22 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 418 | 33.22 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 433 | 33.23 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 527 | 33.28 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 593 | 33.31 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 606 | 33.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 624 | 33.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 9 |
| 639 | 33.33 | temperature | 20.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 716 | 33.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 723 | 33.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 725 | 33.36 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 727 | 33.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 772 | 33.38 | temperature | 25.0 | 14400 | > th | dose independent | sin | 1 | NA |
| 778 | 33.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 799 | 33.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 809 | 33.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 815 | 33.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 821 | 33.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 829 | 33.40 | temperature | 25.0 | 720 | > th | dose independent | rect. | 7 | 2 |
| 837 | 33.40 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 857 | 33.41 | temperature | 25.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 863 | 33.41 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 869 | 33.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 897 | 33.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 909 | 33.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 916 | 33.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 946 | 33.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 960 | 33.43 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |