Os03g0322200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0322200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 357.4 | 0.888 | 5.84 | 0.0919 | 0.38 | 0.313 | 1.73 | -5.49 | 0.209 | 16.7 | 18.76 | 3578 | -- | -- |
| 382.94 | 0.911 | 5.63 | 1.25 | 0.329 | 0.477 | 2.03 | -- | 0.493 | 17.1 | 14.5 | 10755 | -- | -- |
| 364.55 | 0.889 | 5.84 | 0.0639 | 0.38 | 0.315 | -- | -5.5 | 0.202 | 16.5 | 18.88 | 3896 | -- | -- |
| 389.26 | 0.919 | 5.65 | 1.35 | 0.393 | 0.517 | -- | -- | 0.494 | 16.6 | 12.3 | 10811 | -- | -- |
| 372.59 | 0.899 | 5.84 | 0.0417 | -- | 0.266 | -- | -5.66 | 0.199 | -- | 19 | 3906 | -- | -- |
| 384.59 | 0.919 | 5.61 | 1.66 | 0.378 | -- | 1.78 | -- | 0.665 | 16.4 | -- | -- | -- | -- |
| 393.09 | 0.928 | 5.61 | 1.68 | 0.394 | -- | -- | -- | 0.675 | 16.8 | -- | -- | -- | -- |
| 395.41 | 0.93 | 5.63 | 1.55 | -- | 0.64 | -- | -- | 0.579 | -- | 12.3 | 10811 | -- | -- |
| 407.07 | 0.94 | 5.74 | -- | 0.405 | 1.25 | -- | -- | 0.115 | 16.6 | 2.348 | 47520 | -- | -- |
| 401.31 | 0.936 | 5.61 | 1.66 | -- | -- | -- | -- | 0.665 | -- | -- | -- | -- | -- |
| 467.32 | 1.01 | 5.65 | -- | 0.364 | -- | -- | -- | 0.488 | 16.9 | -- | -- | -- | -- |
| 415.8 | 0.95 | 5.73 | -- | -- | 1.23 | -- | -- | 0.112 | -- | 0.8187 | 47520 | -- | -- |
| 474.3 | 1.02 | 5.65 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 342.02 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 18 |
| 5 | 342.33 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 19 |
| 8 | 342.87 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 11 | 343.42 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 12 | 343.74 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 20 |
| 13 | 343.77 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 18 | 343.90 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 17 |
| 26 | 344.38 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 29 | 344.48 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 30 | 344.65 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 56 | 346.34 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 76 | 347.92 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 82 | 348.36 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 91 | 348.52 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 92 | 348.52 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 106 | 348.89 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 109 | 348.96 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 122 | 349.28 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 151 | 350.05 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 157 | 350.17 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 158 | 350.19 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 159 | 350.19 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 164 | 350.31 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 170 | 350.37 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 176 | 350.43 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 180 | 350.56 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 183 | 350.62 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 191 | 350.86 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 193 | 350.89 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 194 | 350.92 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 196 | 350.93 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 202 | 351.06 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 15 |
| 212 | 351.36 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 216 | 351.42 | wind | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 224 | 351.64 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 240 | 351.87 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 15 |
| 272 | 352.31 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 274 | 352.34 | wind | 7.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 277 | 352.35 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 280 | 352.41 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 12 | 5 |
| 286 | 352.54 | wind | 7.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 296 | 352.63 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 306 | 352.74 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 309 | 352.83 | wind | 5.0 | 43200 | > th | dose dependent | sin | 11 | NA |
| 344 | 353.22 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 356 | 353.49 | atmosphere | 995.0 | 43200 | < th | dose dependent | no | NA | NA |
| 357 | 353.49 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 393 | 353.76 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 394 | 353.77 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 405 | 353.87 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 430 | 353.99 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 9 | 8 |
| 433 | 354.01 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 443 | 354.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 444 | 354.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 446 | 354.08 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 461 | 354.14 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 465 | 354.17 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 468 | 354.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 470 | 354.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 497 | 354.37 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 514 | 354.52 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 24 | 7 |
| 518 | 354.54 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 24 | 7 |
| 553 | 354.74 | wind | 3.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 598 | 354.95 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 621 | 355.11 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 665 | 355.28 | wind | 3.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 749 | 355.72 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 751 | 355.73 | wind | 7.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 754 | 355.74 | wind | 7.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 805 | 355.97 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 12 | 2 |
| 807 | 355.99 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 822 | 356.06 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 835 | 356.15 | wind | 1.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 839 | 356.17 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 842 | 356.21 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 843 | 356.21 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 850 | 356.23 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 856 | 356.25 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 858 | 356.26 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 866 | 356.29 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 868 | 356.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 872 | 356.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 874 | 356.31 | wind | 3.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 889 | 356.35 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 895 | 356.38 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 897 | 356.39 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 904 | 356.41 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 913 | 356.45 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 919 | 356.47 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 920 | 356.47 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 923 | 356.49 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 928 | 356.50 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 934 | 356.52 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 944 | 356.57 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 952 | 356.59 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 957 | 356.60 | wind | 3.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 959 | 356.60 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 975 | 356.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 977 | 356.66 | wind | 3.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 983 | 356.67 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 20 | 12 |