Os03g0316400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0316400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.31 | 0.456 | 7.2 | -0.445 | 1.76 | 1.11 | -0.992 | -0.195 | 0.177 | 14.2 | 80.04 | 1329 | -- | -- |
| 94.35 | 0.452 | 7.21 | -0.46 | 1.76 | 1.1 | -1 | -- | 0.174 | 14.2 | 80.01 | 1329 | -- | -- |
| 97.77 | 0.461 | 7.21 | -0.446 | 1.74 | 1.08 | -- | -0.541 | 0.177 | 14.3 | 80.99 | 1289 | -- | -- |
| 98.02 | 0.461 | 7.21 | -0.487 | 1.75 | 1.07 | -- | -- | 0.167 | 14.3 | 81 | 1314 | -- | -- |
| 206.29 | 0.673 | 7.24 | -0.623 | -- | -0.99 | -- | 0.232 | 0.0598 | -- | 80.99 | 1289 | -- | -- |
| 110.17 | 0.492 | 7.22 | -0.488 | 1.86 | -- | -0.872 | -- | 0.105 | 14.2 | -- | -- | -- | -- |
| 112.96 | 0.498 | 7.22 | -0.512 | 1.86 | -- | -- | -- | 0.1 | 14.3 | -- | -- | -- | -- |
| 199.07 | 0.66 | 7.23 | -0.681 | -- | -1.04 | -- | -- | 0.0936 | -- | 78.49 | 1119 | -- | -- |
| 104.32 | 0.476 | 7.2 | -- | 1.76 | 1.08 | -- | -- | 0.223 | 14.3 | 80.24 | 1314 | -- | -- |
| 318.37 | 0.834 | 7.24 | -0.59 | -- | -- | -- | -- | 0.0552 | -- | -- | -- | -- | -- |
| 119.87 | 0.512 | 7.21 | -- | 1.87 | -- | -- | -- | 0.158 | 14.3 | -- | -- | -- | -- |
| 211.21 | 0.679 | 7.22 | -- | -- | -1.03 | -- | -- | 0.156 | -- | 77 | 1116 | -- | -- |
| 327.56 | 0.845 | 7.23 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.56 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 14 | 89.32 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 48 | 91.09 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 52 | 91.24 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 60 | 91.61 | wind | 7.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 70 | 91.87 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 72 | 91.92 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 14 |
| 73 | 91.93 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 2 | 13 |
| 79 | 92.01 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 92 | 92.19 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 24 | 17 |
| 102 | 92.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 103 | 92.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 105 | 92.28 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 111 | 92.36 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 120 | 92.41 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 122 | 92.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 13 |
| 123 | 92.42 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 125 | 92.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 13 |
| 138 | 92.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 18 |
| 149 | 92.61 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 185 | 92.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 186 | 92.84 | wind | 5.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 244 | 93.15 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 246 | 93.15 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 247 | 93.15 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 250 | 93.15 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 251 | 93.15 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 253 | 93.15 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 256 | 93.15 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 261 | 93.16 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 271 | 93.19 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 279 | 93.22 | humidity | 80.0 | 720 | > th | dose independent | rect. | 17 | 8 |
| 289 | 93.25 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 300 | 93.29 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 2 | 9 |
| 315 | 93.34 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 358 | 93.55 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 361 | 93.55 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 379 | 93.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 6 |
| 380 | 93.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 389 | 93.65 | humidity | 80.0 | 720 | > th | dose independent | rect. | 17 | 15 |
| 423 | 93.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 424 | 93.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 457 | 93.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 21 |
| 462 | 93.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 480 | 93.93 | wind | 5.0 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 496 | 93.98 | radiation | 30.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 503 | 94.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 11 |
| 506 | 94.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 525 | 94.05 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 534 | 94.07 | humidity | 50.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 544 | 94.10 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 547 | 94.11 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 583 | 94.20 | radiation | 10.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 604 | 94.24 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 20 |
| 609 | 94.24 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 20 |
| 622 | 94.30 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 630 | 94.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 11 |
| 633 | 94.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 699 | 94.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 21 |
| 707 | 94.44 | radiation | 10.0 | 90 | < th | dose independent | rect. | 2 | 13 |
| 717 | 94.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 719 | 94.46 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 720 | 94.46 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 723 | 94.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 724 | 94.46 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 727 | 94.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 18 |
| 734 | 94.47 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 6 |
| 736 | 94.47 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 741 | 94.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 11 |
| 742 | 94.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 11 |
| 743 | 94.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 13 |
| 747 | 94.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 749 | 94.49 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 750 | 94.49 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 756 | 94.50 | radiation | 10.0 | 30 | < th | dose independent | rect. | 2 | 15 |
| 757 | 94.50 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 768 | 94.52 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 21 |
| 770 | 94.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 797 | 94.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 20 |
| 801 | 94.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 842 | 94.61 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 854 | 94.63 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 855 | 94.63 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 858 | 94.64 | humidity | 80.0 | 270 | > th | dose independent | rect. | 20 | 4 |
| 862 | 94.64 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 886 | 94.67 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 888 | 94.67 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 889 | 94.67 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 892 | 94.67 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 893 | 94.67 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 895 | 94.67 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 945 | 94.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 947 | 94.73 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 953 | 94.74 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 976 | 94.78 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 22 |
| 980 | 94.78 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 982 | 94.79 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 989 | 94.80 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 992 | 94.80 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 1000 | 94.81 | humidity | 80.0 | 720 | > th | dose independent | sin | 12 | NA |