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Os03g0316200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Galactinol synthase (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0453) R2 : 0.755
β1 : -3.13 (0.18) R2dD : 0.206 R2D : 0.284
β2 : 1.55 (0.379) R2dC : 0.116 R2C : -0.53
β3 : -4.88 (0.42) R2dE : 0.941 R2E : 0.365
β4 : 8.79 (1.54) R2dD*C : 0.257 R2D*C : -0.192
β5 : -9.2 (1.65) R2dD*E : 0.243 R2D*E : -0.186
γ1 : 0.102 (0.0961) R2dN8 : 0.000829 R2N8 : 0.00583
σ : 0.841
deviance : 320.38
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_____
C
peak time of C : 0.405
E
wheather : humidity
threshold : 45.74
memory length : 12
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 6.97
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
320.38 0.841 10.7 -3.13 1.55 -4.88 8.79 -9.2 0.102 0.405 45.74 12 6.97 --
341.69 0.868 10.7 -3.54 1.77 -5.19 0.502 -- 0.0639 0.236 45.74 12 6.97 --
341.15 0.867 10.7 -3.55 1.16 -4.46 -- -0.166 0.0452 1.81 54.67 2 6.69 --
341.13 0.866 10.7 -3.55 1.23 -4.55 -- -- 0.0462 1.63 53.89 2 6.7 --
343.78 0.868 10.7 -3.55 -- -3.48 -- -0.503 0.0635 -- 59.61 2 7.64 --
442.58 0.986 10.6 -3.6 2.77 -- -0.0458 -- 0.165 11.8 -- -- -- --
442.59 0.985 10.6 -3.61 2.77 -- -- -- 0.165 11.8 -- -- -- --
344.67 0.868 10.7 -3.56 -- -3.48 -- -- 0.0629 -- 59.5 2 7.62 --
669.87 1.21 10.6 -- 1.46 -4.76 -- -- 0.415 2.24 56.64 2 6.36 --
925.35 1.42 10.6 -3.69 -- -- -- -- 0.13 -- -- -- -- --
785.35 1.31 10.5 -- 2.81 -- -- -- 0.567 11.8 -- -- -- --
678 1.21 10.6 -- -- -3.54 -- -- 0.436 -- 62.8 2 7.49 --
1283.95 1.67 10.5 -- -- -- -- -- 0.539 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 321.51 humidity 50.0 10 > th dose dependent sin 13 NA
4 326.74 humidity 80.0 10 > th dose dependent sin 15 NA
8 328.08 humidity 70.0 270 > th dose dependent rect. 11 15
12 329.56 humidity 70.0 90 > th dose dependent rect. 11 17
23 331.48 humidity 80.0 90 > th dose dependent rect. 9 19
36 332.99 humidity 80.0 90 > th dose dependent rect. 7 21
41 334.11 humidity 80.0 10 > th dose dependent rect. 7 22
54 334.86 humidity 90.0 10 < th dose dependent sin 11 NA
77 336.87 humidity 90.0 90 < th dose independent rect. 15 16
122 340.07 radiation 40.0 14400 > th dose independent rect. 8 1
142 340.37 radiation 40.0 14400 > th dose dependent rect. 14 19
150 341.21 radiation 40.0 14400 > th dose dependent rect. 14 1
187 342.10 radiation 30.0 14400 < th dose independent rect. 15 19
188 342.17 humidity 90.0 30 < th dose independent rect. 13 19
267 343.89 humidity 80.0 270 > th dose independent rect. 11 16
269 343.93 radiation 30.0 14400 < th dose independent rect. 15 8
271 343.96 radiation 30.0 14400 < th dose independent rect. 15 6
273 343.96 radiation 30.0 14400 < th dose independent rect. 15 14
313 344.49 radiation 30.0 14400 < th dose independent sin 12 NA
316 344.51 radiation 30.0 14400 < th dose independent rect. 8 2
320 344.67 precipitation 0.1 43200 > th dose dependent rect. 10 7
322 344.78 radiation 20.0 14400 < th dose independent rect. 15 22
339 345.23 precipitation 0.1 43200 < th dose independent rect. 10 7
340 345.23 precipitation 0.1 43200 < th dose dependent rect. 10 7
345 345.28 precipitation 0.1 43200 > th dose independent rect. 10 7
358 345.50 radiation 30.0 14400 > th dose dependent rect. 8 1
382 345.68 radiation 30.0 14400 > th dose dependent sin 12 NA
390 345.75 humidity 90.0 30 < th dose independent sin 12 NA
399 345.92 radiation 20.0 14400 > th dose independent rect. 16 16
404 345.95 radiation 30.0 14400 > th dose independent sin 12 NA
407 345.95 radiation 40.0 14400 < th dose dependent rect. 16 18
417 346.06 radiation 30.0 14400 < th dose independent rect. 4 6
424 346.07 radiation 30.0 14400 < th dose independent rect. 22 12
469 346.67 radiation 20.0 14400 < th dose independent rect. 10 23
494 346.80 radiation 1.0 14400 > th dose dependent rect. 8 1
495 346.81 radiation 20.0 14400 < th dose dependent rect. 16 22
517 347.08 radiation 40.0 14400 < th dose dependent rect. 18 11
518 347.09 radiation 1.0 14400 > th dose dependent rect. 7 3
520 347.11 radiation 40.0 14400 < th dose dependent sin 11 NA
529 347.19 radiation 10.0 43200 > th dose independent rect. 5 1
578 347.34 radiation 40.0 14400 < th dose dependent rect. 7 3
652 347.57 radiation 20.0 14400 < th dose independent rect. 6 17
653 347.58 radiation 20.0 14400 < th dose independent no NA NA
654 347.58 radiation 20.0 14400 < th dose independent rect. 6 13
697 347.58 radiation 20.0 14400 < th dose independent rect. 20 23
698 347.58 radiation 20.0 14400 < th dose independent rect. 22 23
750 347.61 radiation 20.0 14400 < th dose dependent rect. 11 22
752 347.62 radiation 1.0 14400 > th dose dependent rect. 4 6
805 347.71 radiation 40.0 14400 < th dose dependent rect. 4 6
809 347.71 radiation 40.0 14400 < th dose dependent rect. 22 12
857 347.81 radiation 20.0 14400 < th dose independent rect. 6 7
899 347.84 radiation 20.0 14400 < th dose independent rect. 22 15
900 347.84 radiation 20.0 14400 < th dose independent rect. 20 17
938 347.93 radiation 40.0 14400 < th dose dependent rect. 18 6