Os03g0311300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Soluble quinoprotein glucose dehydrogenase domain containing protein.
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Os03g0311300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Soluble quinoprotein glucose dehydrogenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.25 | 0.34 | 13.3 | -2.06 | 1.14 | 0.445 | 1.16 | 0.385 | -0.619 | 5.84 | 12.21 | 10 | -- | -- |
| 52.46 | 0.34 | 13.3 | -2.04 | 1.12 | 0.389 | 1.24 | -- | -0.628 | 6.18 | 14.75 | 10 | -- | -- |
| 55.33 | 0.346 | 13.3 | -2.06 | 1.16 | 0.498 | -- | 0.46 | -0.635 | 5.67 | 14.5 | 12 | -- | -- |
| 56.02 | 0.349 | 13.3 | -2.04 | 1.14 | 0.478 | -- | -- | -0.635 | 5.73 | 14.6 | 10 | -- | -- |
| 122.07 | 0.517 | 13.3 | -1.97 | -- | 0.367 | -- | 0.473 | -0.591 | -- | 5.13 | 8 | -- | -- |
| 59.21 | 0.361 | 13.3 | -2.02 | 1.18 | -- | 1.34 | -- | -0.62 | 7.3 | -- | -- | -- | -- |
| 64.05 | 0.375 | 13.3 | -1.99 | 1.19 | -- | -- | -- | -0.623 | 7.23 | -- | -- | -- | -- |
| 120.24 | 0.513 | 13.3 | -1.95 | -- | 0.402 | -- | -- | -0.612 | -- | 4.849 | 8 | -- | -- |
| 160.5 | 0.59 | 13.3 | -- | 1.13 | 0.617 | -- | -- | -0.468 | 5.07 | 9.99 | 12 | -- | -- |
| 138.61 | 0.55 | 13.3 | -1.97 | -- | -- | -- | -- | -0.603 | -- | -- | -- | -- | -- |
| 168.78 | 0.608 | 13.2 | -- | 1.17 | -- | -- | -- | -0.401 | 7.34 | -- | -- | -- | -- |
| 220.66 | 0.694 | 13.3 | -- | -- | 0.425 | -- | -- | -0.396 | -- | 4.849 | 8 | -- | -- |
| 241.2 | 0.725 | 13.3 | -- | -- | -- | -- | -- | -0.384 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.93 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 3 | 46.02 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 24 | 47.71 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 26 | 47.89 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 31 | 48.18 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 35 | 48.25 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 76 | 48.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 17 |
| 77 | 48.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 17 |
| 83 | 48.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 20 |
| 84 | 48.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 95 | 49.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 96 | 49.12 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 97 | 49.13 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 100 | 49.15 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 102 | 49.19 | humidity | 90.0 | 90 | < th | dose independent | rect. | 7 | 8 |
| 103 | 49.20 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 104 | 49.21 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 106 | 49.22 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 114 | 49.37 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 126 | 49.38 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 15 |
| 130 | 49.38 | radiation | 10.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 131 | 49.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 132 | 49.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 134 | 49.42 | humidity | 90.0 | 30 | < th | dose independent | rect. | 21 | 17 |
| 135 | 49.43 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 162 | 49.55 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 167 | 49.56 | radiation | 10.0 | 270 | < th | dose independent | rect. | 23 | 9 |
| 169 | 49.56 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 173 | 49.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 174 | 49.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 176 | 49.63 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 180 | 49.63 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 20 |
| 181 | 49.63 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 187 | 49.65 | radiation | 20.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 189 | 49.65 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 190 | 49.66 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 193 | 49.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 196 | 49.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 197 | 49.69 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 206 | 49.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 211 | 49.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 238 | 49.75 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 243 | 49.77 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 268 | 49.78 | humidity | 70.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 275 | 49.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 4 |
| 276 | 49.81 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 279 | 49.82 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 21 |
| 287 | 49.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 294 | 49.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 8 |
| 300 | 49.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 305 | 49.88 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 317 | 49.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 323 | 49.94 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 349 | 49.97 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 5 |
| 358 | 50.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 7 |
| 359 | 50.00 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 362 | 50.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 7 |
| 363 | 50.00 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 365 | 50.01 | radiation | 1.0 | 270 | < th | dose independent | sin | 5 | NA |
| 367 | 50.01 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 20 |
| 372 | 50.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 375 | 50.02 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 4 |
| 377 | 50.02 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 378 | 50.02 | humidity | 90.0 | 10 | < th | dose independent | rect. | 8 | 6 |
| 380 | 50.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 381 | 50.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 383 | 50.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 387 | 50.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 4 |
| 389 | 50.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 4 |
| 390 | 50.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 405 | 50.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 406 | 50.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 408 | 50.06 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 18 | 6 |
| 410 | 50.06 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 24 | 17 |
| 411 | 50.07 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 415 | 50.07 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 416 | 50.08 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 7 |
| 425 | 50.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 15 |
| 433 | 50.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 436 | 50.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 473 | 50.15 | radiation | 1.0 | 270 | > th | dose independent | sin | 17 | NA |
| 480 | 50.17 | radiation | 1.0 | 270 | < th | dose independent | sin | 17 | NA |
| 497 | 50.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 498 | 50.19 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 17 |
| 534 | 50.24 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 536 | 50.24 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 7 |
| 541 | 50.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 564 | 50.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 574 | 50.28 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 18 |
| 576 | 50.28 | radiation | 1.0 | 270 | < th | dose dependent | sin | 17 | NA |
| 594 | 50.31 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 604 | 50.32 | humidity | 70.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 611 | 50.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 612 | 50.33 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 613 | 50.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 638 | 50.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 646 | 50.34 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 18 |
| 649 | 50.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 659 | 50.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 691 | 50.39 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 5 |
| 695 | 50.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 706 | 50.41 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 729 | 50.44 | radiation | 10.0 | 10 | > th | dose independent | sin | 2 | NA |
| 755 | 50.46 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 756 | 50.46 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 779 | 50.48 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 794 | 50.49 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 16 |
| 796 | 50.49 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 830 | 50.55 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 835 | 50.56 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 5 |
| 841 | 50.56 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 19 | 3 |
| 857 | 50.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 889 | 50.62 | temperature | 15.0 | 90 | > th | dose independent | rect. | 21 | 16 |
| 949 | 50.69 | radiation | 30.0 | 10 | < th | dose independent | rect. | 14 | 18 |
| 982 | 50.71 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 986 | 50.71 | humidity | 90.0 | 30 | < th | dose independent | rect. | 23 | 15 |
| 994 | 50.71 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 11 |