Os03g0304500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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Os03g0304500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 231.82 | 0.715 | 7.05 | -1.62 | 2.9 | -0.958 | -0.89 | 2.17 | -1.09 | 6.94 | 65 | 4 | -- | -- |
| 248.06 | 0.739 | 7.06 | -1.54 | 2.88 | -0.82 | -0.968 | -- | -1.07 | 7.07 | 65 | 4 | -- | -- |
| 233.85 | 0.712 | 7.05 | -1.64 | 2.91 | -0.987 | -- | 2.18 | -1.09 | 6.91 | 64.69 | 4 | -- | -- |
| 250.25 | 0.737 | 7.06 | -1.56 | 2.91 | -0.913 | -- | -- | -1.07 | 6.93 | 65 | 4 | -- | -- |
| 646.47 | 1.18 | 7.1 | -1.59 | -- | -0.349 | -- | 2.95 | -0.974 | -- | 51 | 2 | -- | -- |
| 262.52 | 0.76 | 7.04 | -1.52 | 2.72 | -- | -1.43 | -- | -1 | 7.91 | -- | -- | -- | -- |
| 268.44 | 0.767 | 7.04 | -1.56 | 2.72 | -- | -- | -- | -1 | 7.86 | -- | -- | -- | -- |
| 667.26 | 1.21 | 7.11 | -1.52 | -- | -0.258 | -- | -- | -0.98 | -- | 63 | 3 | -- | -- |
| 314.44 | 0.826 | 7.02 | -- | 2.89 | -0.92 | -- | -- | -0.901 | 6.96 | 65 | 4 | -- | -- |
| 670.87 | 1.21 | 7.11 | -1.53 | -- | -- | -- | -- | -0.967 | -- | -- | -- | -- | -- |
| 332.98 | 0.854 | 7 | -- | 2.71 | -- | -- | -- | -0.83 | 7.9 | -- | -- | -- | -- |
| 728.55 | 1.26 | 7.07 | -- | -- | -0.284 | -- | -- | -0.812 | -- | 63 | 3 | -- | -- |
| 732.94 | 1.26 | 7.07 | -- | -- | -- | -- | -- | -0.797 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.80 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 21 | 19 |
| 2 | 218.91 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 3 | 219.09 | humidity | 80.0 | 90 | > th | dose independent | rect. | 23 | 20 |
| 4 | 219.42 | humidity | 80.0 | 10 | > th | dose independent | rect. | 23 | 21 |
| 17 | 221.78 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 27 | 223.61 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 28 | 223.73 | humidity | 80.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 36 | 224.35 | radiation | 10.0 | 90 | < th | dose independent | rect. | 23 | 18 |
| 41 | 224.56 | radiation | 10.0 | 10 | < th | dose independent | rect. | 23 | 18 |
| 54 | 225.08 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 55 | 225.09 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 13 |
| 63 | 225.45 | radiation | 10.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 70 | 225.68 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 23 | 11 |
| 84 | 226.03 | radiation | 30.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 101 | 226.56 | humidity | 80.0 | 90 | < th | dose independent | rect. | 17 | 19 |
| 114 | 226.81 | radiation | 20.0 | 90 | < th | dose independent | rect. | 23 | 11 |
| 125 | 227.11 | radiation | 10.0 | 90 | > th | dose independent | sin | 6 | NA |
| 139 | 227.28 | radiation | 10.0 | 90 | > th | dose independent | rect. | 6 | 6 |
| 182 | 227.91 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 11 | 5 |
| 194 | 228.05 | humidity | 80.0 | 10 | < th | dose independent | sin | 1 | NA |
| 227 | 228.27 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 235 | 228.39 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 15 |
| 298 | 229.07 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 4 |
| 326 | 229.34 | humidity | 80.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 356 | 229.59 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 413 | 230.08 | wind | 9.0 | 90 | < th | dose independent | rect. | 13 | 14 |
| 441 | 230.17 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 6 |
| 446 | 230.22 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 6 |
| 462 | 230.48 | humidity | 70.0 | 10 | > th | dose independent | sin | 8 | NA |
| 491 | 230.57 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 585 | 231.22 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 586 | 231.23 | radiation | 20.0 | 90 | < th | dose independent | sin | 8 | NA |
| 600 | 231.28 | radiation | 10.0 | 30 | < th | dose independent | sin | 5 | NA |
| 688 | 231.70 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 16 |
| 708 | 231.79 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 5 |
| 715 | 231.81 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 12 |
| 717 | 231.82 | humidity | 80.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 721 | 231.84 | humidity | 80.0 | 10 | < th | dose independent | no | NA | NA |
| 766 | 232.00 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 783 | 232.11 | humidity | 70.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 785 | 232.11 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 786 | 232.12 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 5 |
| 809 | 232.26 | humidity | 80.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 836 | 232.35 | humidity | 80.0 | 10 | > th | dose independent | no | NA | NA |
| 865 | 232.49 | humidity | 80.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 866 | 232.49 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 23 |
| 867 | 232.49 | humidity | 80.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 868 | 232.49 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 12 | 5 |
| 878 | 232.53 | humidity | 80.0 | 10 | > th | dose independent | sin | 5 | NA |
| 879 | 232.53 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 19 |
| 898 | 232.58 | humidity | 80.0 | 10 | > th | dose independent | rect. | 19 | 23 |
| 931 | 232.70 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 10 |
| 944 | 232.70 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 946 | 232.71 | humidity | 80.0 | 10 | > th | dose independent | rect. | 15 | 23 |
| 954 | 232.74 | humidity | 80.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 991 | 232.91 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 12 | 22 |