Os03g0302800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0302800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 264.71 | 0.764 | 3.04 | -0.0965 | 0.17 | 4.59 | -0.852 | 10.9 | -0.0903 | 11.1 | 8.81 | 19 | -- | -- |
| 270 | 0.765 | 3.01 | -0.0783 | 0.134 | 1.9 | -0.656 | -- | -0.0709 | 8.53 | 8.999 | 25 | -- | -- |
| 267.71 | 0.762 | 3.04 | -0.0975 | 0.167 | 4.57 | -- | 10.5 | -0.0843 | 11.7 | 8.804 | 18 | -- | -- |
| 269.33 | 0.764 | 3.02 | -0.199 | 0.124 | 1.88 | -- | -- | -0.1 | 11.6 | 9.1 | 18 | -- | -- |
| 269.54 | 0.765 | 3.04 | -0.133 | -- | 4.28 | -- | 8.94 | -0.0928 | -- | 8.8 | 18 | -- | -- |
| 275.14 | 0.778 | 3.02 | -0.245 | 0.215 | -- | -0.791 | -- | -0.117 | 12 | -- | -- | -- | -- |
| 277.8 | 0.781 | 3.02 | -0.276 | 0.22 | -- | -- | -- | -0.12 | 12.5 | -- | -- | -- | -- |
| 271.07 | 0.767 | 3.02 | -0.189 | -- | 2.08 | -- | -- | -0.0871 | -- | 9.077 | 18 | -- | -- |
| 269.98 | 0.765 | 3.01 | -- | 0.178 | 2.09 | -- | -- | -0.0644 | 11.8 | 9.049 | 18 | -- | -- |
| 280.85 | 0.783 | 3.03 | -0.283 | -- | -- | -- | -- | -0.124 | -- | -- | -- | -- | -- |
| 279.81 | 0.782 | 3.01 | -- | 0.224 | -- | -- | -- | -0.0891 | 12.6 | -- | -- | -- | -- |
| 271.96 | 0.768 | 3.01 | -- | -- | 2.2 | -- | -- | -0.0634 | -- | 8.988 | 18 | -- | -- |
| 282.97 | 0.785 | 3.02 | -- | -- | -- | -- | -- | -0.0921 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.13 | wind | 9.0 | 90 | > th | dose dependent | rect. | 11 | 2 |
| 51 | 257.44 | wind | 9.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 62 | 257.82 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 3 |
| 74 | 258.86 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 113 | 260.32 | wind | 9.0 | 30 | < th | dose independent | sin | 3 | NA |
| 114 | 260.36 | wind | 9.0 | 30 | > th | dose independent | sin | 4 | NA |
| 189 | 262.35 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 7 |
| 193 | 262.35 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 7 |
| 264 | 262.57 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 22 | 4 |
| 267 | 262.57 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 22 | 4 |
| 334 | 262.83 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 340 | 262.87 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 350 | 262.87 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 370 | 262.99 | humidity | 90.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 374 | 263.04 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 1 |
| 402 | 263.30 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 435 | 263.61 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 475 | 263.79 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 24 | 2 |
| 509 | 264.13 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 512 | 264.21 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 24 | 3 |
| 528 | 264.30 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 535 | 264.41 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 539 | 264.46 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 545 | 264.59 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 551 | 264.63 | wind | 3.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 560 | 264.78 | wind | 3.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 563 | 264.81 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 587 | 265.01 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 597 | 265.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 607 | 265.17 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 628 | 265.29 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 635 | 265.32 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 16 | 17 |
| 650 | 265.45 | wind | 3.0 | 270 | < th | dose independent | rect. | 21 | 2 |
| 660 | 265.45 | wind | 3.0 | 270 | < th | dose dependent | rect. | 13 | 13 |
| 662 | 265.46 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 663 | 265.46 | wind | 9.0 | 270 | > th | dose dependent | rect. | 9 | 3 |
| 673 | 265.47 | wind | 3.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 763 | 265.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 19 |
| 801 | 265.91 | wind | 3.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 807 | 265.99 | radiation | 30.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 818 | 266.05 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 823 | 266.08 | wind | 3.0 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 836 | 266.15 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 24 | 2 |
| 840 | 266.16 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 850 | 266.23 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 18 |
| 852 | 266.24 | wind | 3.0 | 90 | < th | dose independent | rect. | 2 | 9 |
| 855 | 266.28 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 19 | 13 |
| 877 | 266.36 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 886 | 266.40 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 16 | 14 |
| 887 | 266.40 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 11 | 17 |
| 903 | 266.45 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 1 |
| 915 | 266.49 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 936 | 266.51 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 977 | 266.53 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 1 |