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Os03g0302500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0181) R2 : 0.491
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.826 (0.0449) R2dC : 0.38 R2C : 0.341
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.388 (0.0379) R2dN8 : 0.151 R2N8 : 0.111
σ : 0.34
deviance : 52.88
__
_____
C
peak time of C : 21.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.83 0.307 13.4 0.198 0.869 0.272 0.64 1.29 0.331 21.2 58 1929 -- --
45.13 0.313 13.4 0.214 0.88 0.393 0.607 -- 0.32 21.3 63.59 1035 -- --
44.14 0.309 13.4 0.18 0.864 0.265 -- 1.23 0.335 21.1 56.02 1910 -- --
46.09 0.316 13.4 0.218 0.907 0.42 -- -- 0.313 21.3 63 1055 -- --
85.72 0.431 13.4 0.168 -- 0.28 -- 1.38 0.344 -- 57 2999 -- --
51.51 0.336 13.3 0.168 0.824 -- 0.478 -- 0.405 21.2 -- -- -- --
52.27 0.339 13.3 0.152 0.826 -- -- -- 0.405 21 -- -- -- --
86.01 0.432 13.4 0.149 -- 0.555 -- -- 0.27 -- 62.48 4363 -- --
47.39 0.321 13.4 -- 0.91 0.427 -- -- 0.292 21.3 63 1021 -- --
91.51 0.447 13.3 0.153 -- -- -- -- 0.4 -- -- -- -- --
52.88 0.34 13.3 -- 0.826 -- -- -- 0.388 21.1 -- -- -- --
86.59 0.433 13.4 -- -- 0.564 -- -- 0.254 -- 62.02 4379 -- --
92.13 0.448 13.3 -- -- -- -- -- 0.383 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.60 precipitation 0.1 43200 > th dose dependent rect. 16 4
2 41.62 temperature 10.0 270 > th dose dependent rect. 18 9
6 41.87 temperature 20.0 90 > th dose independent rect. 11 16
11 42.24 wind 1.0 14400 < th dose independent rect. 5 1
12 42.26 humidity 60.0 720 > th dose independent rect. 10 19
13 42.28 humidity 60.0 720 > th dose independent rect. 11 10
17 42.32 humidity 50.0 14400 > th dose independent sin 13 NA
25 42.38 humidity 60.0 14400 > th dose independent rect. 10 2
28 42.42 precipitation 0.1 43200 < th dose independent rect. 16 2
29 42.42 precipitation 0.1 43200 < th dose dependent rect. 16 2
35 42.46 temperature 20.0 270 > th dose independent rect. 9 16
37 42.47 precipitation 0.1 43200 > th dose independent rect. 16 2
45 42.61 humidity 60.0 14400 > th dose independent rect. 8 5
46 42.62 humidity 60.0 14400 > th dose independent rect. 2 11
48 42.62 humidity 60.0 14400 > th dose independent rect. 23 14
61 42.65 humidity 60.0 14400 < th dose independent rect. 9 4
63 42.66 humidity 70.0 14400 < th dose dependent rect. 9 2
85 42.71 humidity 60.0 720 > th dose independent sin 19 NA
95 42.72 humidity 60.0 14400 > th dose independent sin 8 NA
105 42.76 humidity 50.0 14400 > th dose independent rect. 14 19
107 42.77 temperature 20.0 14400 > th dose independent rect. 20 1
109 42.77 humidity 50.0 14400 > th dose independent rect. 14 14
114 42.78 humidity 50.0 14400 > th dose independent rect. 14 4
115 42.78 humidity 50.0 14400 > th dose independent rect. 14 10
123 42.79 humidity 50.0 14400 > th dose independent rect. 14 8
139 42.84 temperature 20.0 14400 < th dose independent rect. 21 1
140 42.85 humidity 50.0 14400 < th dose independent sin 13 NA
142 42.85 humidity 70.0 720 > th dose independent rect. 17 2
151 42.91 humidity 50.0 14400 > th dose independent rect. 15 21
156 42.94 wind 1.0 14400 > th dose independent rect. 2 6
158 42.95 wind 1.0 14400 > th dose independent rect. 2 8
159 42.95 wind 1.0 14400 < th dose independent rect. 2 8
161 42.96 humidity 60.0 14400 < th dose independent sin 7 NA
172 43.01 wind 1.0 14400 > th dose independent rect. 5 1
179 43.04 radiation 20.0 43200 > th dose independent rect. 9 3
182 43.05 wind 1.0 14400 < th dose independent rect. 2 6
206 43.11 humidity 70.0 720 > th dose independent rect. 17 12
208 43.12 wind 1.0 14400 > th dose independent rect. 24 7
214 43.13 precipitation 0.1 14400 < th dose independent rect. 5 13
217 43.13 precipitation 0.1 14400 < th dose dependent rect. 5 13
218 43.14 wind 5.0 14400 > th dose independent rect. 7 1
219 43.14 wind 5.0 14400 < th dose independent rect. 7 1
233 43.15 humidity 50.0 14400 < th dose independent rect. 15 21
234 43.15 wind 1.0 43200 < th dose dependent rect. 12 1
245 43.16 precipitation 0.1 14400 > th dose independent rect. 5 13
251 43.16 temperature 30.0 720 < th dose independent rect. 10 23
254 43.17 humidity 70.0 720 > th dose independent rect. 17 4
259 43.17 temperature 30.0 720 < th dose independent rect. 8 23
278 43.22 wind 5.0 14400 < th dose independent rect. 6 3
281 43.23 wind 5.0 14400 > th dose independent rect. 6 3
304 43.28 temperature 30.0 270 < th dose independent rect. 9 16
330 43.33 temperature 30.0 90 < th dose dependent rect. 15 16
333 43.34 radiation 30.0 43200 < th dose dependent rect. 10 1
374 43.39 temperature 25.0 270 < th dose dependent rect. 15 14
377 43.40 temperature 30.0 720 < th dose independent sin 20 NA
388 43.41 humidity 70.0 14400 < th dose dependent sin 8 NA
395 43.42 humidity 70.0 720 > th dose independent rect. 17 18
433 43.47 humidity 90.0 14400 > th dose independent rect. 21 1
440 43.48 temperature 15.0 10 > th dose dependent rect. 5 15
457 43.51 radiation 10.0 43200 > th dose independent rect. 7 3
462 43.51 wind 1.0 14400 < th dose dependent rect. 2 6
464 43.52 radiation 10.0 43200 > th dose independent rect. 6 8
492 43.55 radiation 10.0 43200 > th dose independent rect. 17 18
494 43.55 humidity 50.0 14400 < th dose independent rect. 14 19
498 43.56 humidity 50.0 14400 < th dose independent rect. 14 4
514 43.57 humidity 70.0 720 > th dose independent sin 11 NA
515 43.57 wind 1.0 14400 > th dose independent rect. 1 2
517 43.57 radiation 10.0 43200 > th dose independent rect. 6 5
520 43.57 temperature 20.0 90 > th dose independent rect. 20 8
534 43.57 wind 1.0 14400 < th dose dependent rect. 2 8
547 43.59 precipitation 0.1 14400 > th dose dependent rect. 4 15
554 43.61 radiation 10.0 43200 > th dose independent sin 7 NA
563 43.61 radiation 20.0 43200 < th dose dependent rect. 9 4
582 43.62 temperature 30.0 720 < th dose independent rect. 13 22
593 43.63 temperature 20.0 270 > th dose independent rect. 18 8
597 43.63 precipitation 0.1 43200 > th dose dependent rect. 20 1
658 43.67 wind 9.0 14400 > th dose dependent rect. 16 21
681 43.70 humidity 50.0 720 > th dose dependent rect. 10 12
683 43.70 humidity 50.0 720 > th dose dependent rect. 9 14
706 43.72 wind 5.0 14400 > th dose dependent rect. 19 2
815 43.79 humidity 60.0 14400 < th dose dependent sin 16 NA
833 43.81 wind 7.0 14400 < th dose independent rect. 18 3
874 43.84 humidity 60.0 4320 < th dose dependent rect. 15 1
888 43.85 precipitation 0.1 14400 > th dose dependent sin 1 NA
909 43.87 temperature 30.0 270 < th dose independent rect. 7 8
910 43.87 temperature 30.0 720 < th dose independent rect. 11 9
930 43.88 radiation 10.0 270 < th dose independent sin 13 NA
935 43.88 wind 9.0 14400 < th dose independent rect. 17 18
961 43.89 humidity 60.0 14400 < th dose dependent rect. 12 7