Os03g0299600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Wound-induced WI12 family protein.
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Os03g0299600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Wound-induced WI12 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.32 | 0.468 | 13.8 | 0.76 | 0.854 | 1.34 | 1.54 | -1.92 | 0.0797 | 21.1 | 20.08 | 710 | 5.02 | 3.03 |
| 102.55 | 0.472 | 13.8 | 1.04 | 0.883 | 1.32 | 1.73 | -- | 0.118 | 21.6 | 19.29 | 709 | 5.07 | 3.12 |
| 106.25 | 0.48 | 13.8 | 0.582 | 0.901 | 1.41 | -- | -2.58 | 0.0321 | 21.6 | 19.43 | 715 | 5.02 | 2.98 |
| 114.11 | 0.498 | 13.8 | 1.04 | 0.851 | 1.32 | -- | -- | 0.16 | 21.6 | 19.24 | 712 | 5.05 | 3.23 |
| 132.55 | 0.536 | 13.8 | 0.568 | -- | 1.18 | -- | -2.13 | 0.0448 | -- | 21.33 | 952 | 5.48 | 3.47 |
| 151.23 | 0.577 | 13.7 | 1.25 | 0.69 | -- | 2.12 | -- | 0.408 | 18.5 | -- | -- | -- | -- |
| 161.02 | 0.594 | 13.7 | 1.23 | 0.719 | -- | -- | -- | 0.417 | 17.7 | -- | -- | -- | -- |
| 133.44 | 0.538 | 13.8 | 0.959 | -- | 1.06 | -- | -- | 0.118 | -- | 20.7 | 983 | 5.38 | 3.62 |
| 139.7 | 0.55 | 13.8 | -- | 0.829 | 1.39 | -- | -- | 0.0978 | 22.2 | 18.87 | 720 | 5.03 | 3.45 |
| 187.88 | 0.64 | 13.7 | 1.21 | -- | -- | -- | -- | 0.4 | -- | -- | -- | -- | -- |
| 200.83 | 0.663 | 13.8 | -- | 0.7 | -- | -- | -- | 0.28 | 17.7 | -- | -- | -- | -- |
| 154.08 | 0.578 | 13.9 | -- | -- | 1.52 | -- | -- | -0.0819 | -- | 17.66 | 5211 | 6.66 | 3.93 |
| 226.25 | 0.702 | 13.7 | -- | -- | -- | -- | -- | 0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.42 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 13 | 105.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 20 | 106.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 73 | 110.76 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 5 |
| 76 | 110.87 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 2 |
| 108 | 112.93 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 9 |
| 122 | 113.66 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 133 | 114.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 161 | 115.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 242 | 118.69 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 4 |
| 339 | 120.72 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 343 | 120.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 344 | 120.77 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 349 | 120.87 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 350 | 120.88 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 373 | 121.21 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 388 | 121.52 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 15 |
| 391 | 121.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 394 | 121.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 397 | 121.55 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 431 | 121.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 451 | 121.86 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 486 | 122.03 | temperature | 25 | 30 | > th | dose dependent | rect. | 14 | 23 |
| 568 | 122.77 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 570 | 122.79 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 602 | 123.11 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 3 |
| 675 | 123.56 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 12 |
| 683 | 123.63 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 17 |
| 767 | 123.87 | radiation | 1 | 720 | < th | dose dependent | sin | 9 | NA |
| 777 | 123.95 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 13 |
| 782 | 123.96 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 803 | 124.09 | temperature | 25 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 942 | 124.81 | radiation | 1 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 970 | 125.00 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 982 | 125.11 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 986 | 125.13 | humidity | 60 | 720 | > th | dose independent | rect. | 17 | 3 |
| 999 | 125.19 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 10 |