Os03g0296700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0296700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.63 | 0.476 | 6.08 | -1.97 | 1.21 | -0.547 | 0.332 | -0.795 | -0.232 | 6.22 | 999.6 | 11159 | -- | -- |
| 102.94 | 0.473 | 6.07 | -1.93 | 1.2 | -0.682 | 0.312 | -- | -0.236 | 6.23 | 999.4 | 11149 | -- | -- |
| 102.9 | 0.472 | 6.08 | -1.97 | 1.21 | -0.547 | -- | -0.787 | -0.233 | 6.23 | 999.5 | 11181 | -- | -- |
| 103.2 | 0.473 | 6.07 | -1.93 | 1.21 | -0.692 | -- | -- | -0.239 | 6.24 | 999.4 | 11147 | -- | -- |
| 178.85 | 0.623 | 6.1 | -1.94 | -- | -0.569 | -- | -0.875 | -0.209 | -- | 1000 | 10903 | -- | -- |
| 114.63 | 0.502 | 6.05 | -2.07 | 1.21 | -- | 0.344 | -- | -0.177 | 6.2 | -- | -- | -- | -- |
| 114.92 | 0.502 | 6.05 | -2.06 | 1.22 | -- | -- | -- | -0.178 | 6.21 | -- | -- | -- | -- |
| 179.16 | 0.623 | 6.09 | -1.9 | -- | -0.728 | -- | -- | -0.216 | -- | 999.8 | 10926 | -- | -- |
| 197.26 | 0.654 | 6.03 | -- | 1.19 | -1.08 | -- | -- | -0.0746 | 6.34 | 1000 | 11674 | -- | -- |
| 191.58 | 0.647 | 6.08 | -2.03 | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
| 227.09 | 0.705 | 6 | -- | 1.19 | -- | -- | -- | 0.052 | 6.31 | -- | -- | -- | -- |
| 269.81 | 0.765 | 6.05 | -- | -- | -1.09 | -- | -- | -0.0537 | -- | 1000 | 11759 | -- | -- |
| 300.25 | 0.809 | 6.02 | -- | -- | -- | -- | -- | 0.0741 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.30 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 96.55 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 3 | 96.55 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 5 | 96.75 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 14 |
| 10 | 96.80 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 14 | 96.86 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 41 | 97.26 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 49 | 97.35 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 54 | 97.38 | wind | 5.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 56 | 97.40 | wind | 5.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 87 | 97.66 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 101 | 97.77 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 116 | 97.86 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 147 | 98.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 158 | 98.16 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 159 | 98.17 | wind | 5.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 180 | 98.26 | wind | 5.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 211 | 98.43 | wind | 5.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 231 | 98.52 | wind | 5.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 289 | 98.82 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 380 | 99.26 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 382 | 99.26 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 383 | 99.27 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 410 | 99.39 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 413 | 99.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 488 | 99.76 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 518 | 99.89 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 525 | 99.90 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 532 | 99.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 579 | 100.13 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 11 | 10 |
| 610 | 100.24 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 616 | 100.25 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 641 | 100.35 | temperature | 30.0 | 30 | < th | dose independent | rect. | 15 | 19 |
| 653 | 100.39 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 664 | 100.41 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 697 | 100.51 | wind | 5.0 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 741 | 100.60 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 803 | 100.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 807 | 100.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 882 | 100.98 | wind | 5.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 891 | 101.00 | wind | 5.0 | 14400 | > th | dose independent | no | NA | NA |
| 900 | 101.02 | wind | 5.0 | 14400 | < th | dose independent | no | NA | NA |
| 924 | 101.07 | wind | 3.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 957 | 101.15 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 8 |