Os03g0295800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Gamma interferon inducible lysosomal thiol reductase GILT family protein.
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Os03g0295800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Gamma interferon inducible lysosomal thiol reductase GILT family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.83 | 0.204 | 13.7 | 0.292 | 0.409 | -0.402 | 0.836 | 0.284 | -0.0117 | 5.71 | 71.01 | 978 | -- | -- |
| 18.96 | 0.203 | 13.7 | 0.323 | 0.418 | -0.4 | 0.889 | -- | -0.000687 | 5.79 | 71.55 | 960 | -- | -- |
| 20.51 | 0.211 | 13.7 | 0.29 | 0.418 | -0.397 | -- | 0.425 | -0.0143 | 5.73 | 71.36 | 971 | -- | -- |
| 20.75 | 0.212 | 13.7 | 0.333 | 0.424 | -0.391 | -- | -- | 0.00266 | 5.78 | 72 | 955 | -- | -- |
| 26.5 | 0.24 | 13.7 | 0.217 | -- | -0.402 | -- | 0.466 | -0.0294 | -- | 71 | 1201 | -- | -- |
| 23.21 | 0.226 | 13.7 | 0.4 | 0.372 | -- | 0.697 | -- | 0.0349 | 4.46 | -- | -- | -- | -- |
| 24.46 | 0.232 | 13.7 | 0.394 | 0.375 | -- | -- | -- | 0.0312 | 4.14 | -- | -- | -- | -- |
| 26.61 | 0.24 | 13.7 | 0.333 | -- | -0.386 | -- | -- | -0.00791 | -- | 72.45 | 1198 | -- | -- |
| 23.71 | 0.227 | 13.7 | -- | 0.409 | -0.415 | -- | -- | -0.0431 | 5.69 | 71 | 1021 | -- | -- |
| 32.11 | 0.265 | 13.7 | 0.409 | -- | -- | -- | -- | 0.0412 | -- | -- | -- | -- | -- |
| 28.56 | 0.25 | 13.7 | -- | 0.383 | -- | -- | -- | -0.0127 | 4.12 | -- | -- | -- | -- |
| 29.46 | 0.253 | 13.7 | -- | -- | -0.429 | -- | -- | -0.0495 | -- | 72 | 1198 | -- | -- |
| 36.53 | 0.282 | 13.7 | -- | -- | -- | -- | -- | -0.00425 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.33 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 2 | 18.42 | humidity | 90 | 720 | < th | dose dependent | rect. | 9 | 12 |
| 20 | 18.55 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 14 |
| 21 | 18.56 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 31 | 18.59 | humidity | 90 | 720 | < th | dose dependent | sin | 21 | NA |
| 46 | 18.63 | humidity | 80 | 720 | > th | dose independent | rect. | 5 | 14 |
| 74 | 18.70 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 87 | 18.74 | humidity | 80 | 720 | < th | dose independent | rect. | 7 | 13 |
| 118 | 18.81 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 130 | 18.83 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 10 |
| 141 | 18.83 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 21 |
| 165 | 18.87 | humidity | 50 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 179 | 18.90 | humidity | 80 | 720 | < th | dose independent | rect. | 10 | 10 |
| 212 | 18.93 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 223 | 18.93 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 245 | 18.96 | humidity | 90 | 720 | < th | dose dependent | no | NA | NA |
| 247 | 18.96 | humidity | 50 | 720 | > th | dose dependent | rect. | 6 | 11 |
| 256 | 18.96 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 259 | 18.97 | humidity | 50 | 720 | > th | dose dependent | sin | 0 | NA |
| 350 | 19.02 | humidity | 50 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 392 | 19.04 | humidity | 50 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 397 | 19.05 | humidity | 80 | 720 | > th | dose independent | sin | 0 | NA |
| 398 | 19.05 | humidity | 80 | 720 | < th | dose independent | sin | 23 | NA |
| 411 | 19.06 | humidity | 50 | 720 | > th | dose dependent | no | NA | NA |
| 436 | 19.08 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 441 | 19.08 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 481 | 19.11 | humidity | 50 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 483 | 19.11 | humidity | 80 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 536 | 19.16 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 541 | 19.17 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 562 | 19.18 | humidity | 50 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 578 | 19.20 | humidity | 90 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 633 | 19.25 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 637 | 19.26 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 722 | 19.33 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 799 | 19.39 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 20 |
| 827 | 19.41 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 840 | 19.42 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 13 |
| 893 | 19.45 | humidity | 80 | 720 | > th | dose dependent | rect. | 9 | 13 |
| 903 | 19.46 | humidity | 80 | 720 | > th | dose dependent | rect. | 10 | 11 |
| 920 | 19.47 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 17 |
| 925 | 19.48 | radiation | 1 | 720 | > th | dose independent | sin | 20 | NA |
| 946 | 19.49 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 18 |