Os03g0295500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CHCH domain containing protein.
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Os03g0295500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CHCH domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.11 | 0.157 | 12.7 | -0.49 | 0.0726 | 0.632 | -0.000546 | 0.15 | -0.133 | 3.47 | 9.499 | 4634 | -- | -- |
| 11.14 | 0.155 | 12.7 | -0.514 | 0.0656 | 0.623 | -0.0161 | -- | -0.142 | 3.18 | 10.41 | 4563 | -- | -- |
| 11.11 | 0.155 | 12.7 | -0.49 | 0.0726 | 0.632 | -- | 0.149 | -0.133 | 3.47 | 9.48 | 4630 | -- | -- |
| 11.13 | 0.155 | 12.7 | -0.524 | 0.0728 | 0.625 | -- | -- | -0.142 | 3.44 | 10.26 | 4629 | -- | -- |
| 11.32 | 0.157 | 12.7 | -0.493 | -- | 0.628 | -- | 0.111 | -0.134 | -- | 10.15 | 4296 | -- | -- |
| 18.04 | 0.199 | 12.7 | -0.233 | 0.0835 | -- | 0.00034 | -- | -0.0197 | 3.01 | -- | -- | -- | -- |
| 18.04 | 0.199 | 12.7 | -0.233 | 0.0835 | -- | -- | -- | -0.0197 | 3.01 | -- | -- | -- | -- |
| 11.33 | 0.157 | 12.7 | -0.518 | -- | 0.623 | -- | -- | -0.141 | -- | 9.447 | 4277 | -- | -- |
| 15.04 | 0.181 | 12.7 | -- | 0.0644 | 0.381 | -- | -- | 0.00479 | 2.92 | 26.7 | 2217 | -- | -- |
| 18.44 | 0.201 | 12.7 | -0.229 | -- | -- | -- | -- | -0.0175 | -- | -- | -- | -- | -- |
| 19.46 | 0.206 | 12.7 | -- | 0.079 | -- | -- | -- | 0.00626 | 2.99 | -- | -- | -- | -- |
| 15.13 | 0.181 | 12.7 | -- | -- | 0.344 | -- | -- | 0.0106 | -- | 26.6 | 2465 | -- | -- |
| 19.82 | 0.208 | 12.7 | -- | -- | -- | -- | -- | 0.00793 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 5 | 10.43 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 6 | 10.45 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 11 | 10.50 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 12 | 10.51 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 17 | 10.53 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 22 | 10.55 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 30 | 10.57 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 44 | 10.58 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 45 | 10.58 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 62 | 10.60 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 65 | 10.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 76 | 10.64 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 87 | 10.66 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 9 | 7 |
| 107 | 10.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 130 | 10.69 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 210 | 10.72 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 226 | 10.73 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 259 | 10.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 262 | 10.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 276 | 10.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 282 | 10.76 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 22 | NA |
| 313 | 10.77 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 316 | 10.77 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 338 | 10.78 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 463 | 10.85 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 488 | 10.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 522 | 10.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 554 | 10.88 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 580 | 10.89 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 628 | 10.90 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 637 | 10.90 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 7 | 12 |
| 724 | 10.93 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 834 | 10.96 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 13 | 7 |
| 874 | 10.97 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 6 | 8 |
| 893 | 10.98 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 896 | 10.98 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 22 | NA |
| 945 | 10.99 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 995 | 11.00 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |