Os03g0294700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene-overproduction protein 1.
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Os03g0294700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene-overproduction protein 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.04 | 0.525 | 6.32 | 2.12 | 2.4 | 3.23 | 2.75 | 1.64 | 0.107 | 18.4 | 1.262 | 804 | -- | -- |
| 124.5 | 0.52 | 6.3 | 2.16 | 2.11 | 2.89 | 1.68 | -- | 0.138 | 18.6 | 1.711 | 839 | -- | -- |
| 126.84 | 0.525 | 6.3 | 2.24 | 2.69 | 3.63 | -- | -2 | 0.183 | 18.4 | 2.199 | 811 | -- | -- |
| 130.77 | 0.533 | 6.3 | 2.11 | 2.05 | 2.76 | -- | -- | 0.125 | 18.6 | 1.927 | 837 | -- | -- |
| 141.74 | 0.554 | 6.26 | 1.71 | -- | 0.187 | -- | 0.993 | 0.0329 | -- | 32.58 | 10157 | -- | -- |
| 140.78 | 0.556 | 6.28 | 1.92 | 0.0482 | -- | 1.32 | -- | 0.0055 | 19.1 | -- | -- | -- | -- |
| 145.26 | 0.564 | 6.28 | 1.89 | 0.0661 | -- | -- | -- | 0.00928 | 16.7 | -- | -- | -- | -- |
| 142.84 | 0.557 | 6.25 | 1.82 | -- | 0.331 | -- | -- | 0.106 | -- | 44.47 | 7179 | -- | -- |
| 233.29 | 0.711 | 6.34 | -- | 0.884 | 1.19 | -- | -- | -0.142 | 18.4 | 9.993 | 804 | -- | -- |
| 145.49 | 0.564 | 6.28 | 1.89 | -- | -- | -- | -- | 0.00755 | -- | -- | -- | -- | -- |
| 239.67 | 0.724 | 6.32 | -- | 0.0342 | -- | -- | -- | -0.202 | 18.3 | -- | -- | -- | -- |
| 224.25 | 0.697 | 6.27 | -- | -- | 0.828 | -- | -- | 0.0228 | -- | 10 | 7239 | -- | -- |
| 239.73 | 0.723 | 6.32 | -- | -- | -- | -- | -- | -0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 11 |
| 5 | 122.87 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 6 | 122.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 9 | 123.09 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 17 | 123.57 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 18 | 123.61 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 19 | 123.63 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 24 | 123.94 | temperature | 20.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 27 | 124.07 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 33 | 124.23 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 35 | 124.25 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 2 | 10 |
| 44 | 124.41 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 7 |
| 46 | 124.43 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 49 | 124.45 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 53 | 124.46 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 62 | 124.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 88 | 124.52 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 134 | 124.64 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 20 |
| 140 | 124.64 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 157 | 124.69 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 158 | 124.69 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 161 | 124.71 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 9 |
| 163 | 124.72 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 213 | 124.79 | wind | 7.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 214 | 124.80 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 243 | 124.90 | radiation | 1.0 | 1440 | < th | dose independent | sin | 20 | NA |
| 287 | 125.03 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 21 | NA |
| 299 | 125.06 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 337 | 125.19 | radiation | 1.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 353 | 125.24 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 18 | NA |
| 487 | 125.75 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 20 |
| 488 | 125.76 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 510 | 125.86 | temperature | 25.0 | 30 | < th | dose dependent | sin | 3 | NA |
| 521 | 125.91 | temperature | 10.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 530 | 125.93 | radiation | 1.0 | 720 | < th | dose independent | rect. | 3 | 20 |
| 540 | 125.96 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 20 |
| 619 | 126.18 | temperature | 30.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 632 | 126.23 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 641 | 126.25 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 22 |
| 678 | 126.33 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 767 | 126.56 | wind | 7.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 811 | 126.63 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 819 | 126.66 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 820 | 126.67 | wind | 7.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 833 | 126.71 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 858 | 126.79 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 881 | 126.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 4 |