BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0294700 Os03g0294700|AK111836
(595 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G51770.2 | chr3:19200328-19203998 REVERSE LENGTH=960 830 0.0
AT5G58550.1 | chr5:23665451-23668474 REVERSE LENGTH=926 664 0.0
AT4G02680.1 | chr4:1181202-1184328 REVERSE LENGTH=889 606 e-173
>AT3G51770.2 | chr3:19200328-19203998 REVERSE LENGTH=960
Length = 959
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/587 (66%), Positives = 476/587 (81%)
Query: 1 EAAHLLVAACLQAFLRELPKSLSNPDVARLLCSPDGRERLDIAGNASFALYYFLSSVAME 60
EAA+LLVAACLQ FLRELP S+ NP+V ++ CS +GRERL G+ASF LY+FLS +AME
Sbjct: 366 EAAYLLVAACLQVFLRELPSSMHNPNVIKIFCSAEGRERLASLGHASFTLYFFLSQIAME 425
Query: 61 EDIRSNTTVMLLERLCESAERPWQKQLALHQFGCVMLERGEFKDAQGWFEDAIAEGHTYS 120
+D++SNTTVMLLERL E A W+KQLA HQ G VMLER E+KDAQ WF A+ GH YS
Sbjct: 426 DDMKSNTTVMLLERLVECAVDSWEKQLAYHQLGVVMLERKEYKDAQRWFNAAVEAGHLYS 485
Query: 121 LAGVARSKFKRGHKYSAYKMMNSIMEDYEPAGWMYQERSLYCVGKEKMADLHIATELDPT 180
L GVAR+KFKR H+YSAYK++NS++ D++ GWM+QERSLYC GKEK+ DL ATE DPT
Sbjct: 486 LVGVARTKFKRDHRYSAYKIINSLISDHKATGWMHQERSLYCSGKEKLLDLDTATEFDPT 545
Query: 181 LTFPYKYRAVVFLEEDMVESAVAEISKVLGFKLVTDCLELRAWFYLALEEYEAAVRDIRA 240
LTFPYK+RAV +EE+ +A+AE++K+LGFK DCLE+RAW + +E+YE A++DIRA
Sbjct: 546 LTFPYKFRAVALVEENQFGAAIAELNKILGFKASPDCLEMRAWISIGMEDYEGALKDIRA 605
Query: 241 ILTLDPSYMMFHGKVHGEQLIEILRGYVQQWDMADCWMQLYDRWSEVDDIGSLAVVQQML 300
+LTL+P++MMF+ K+HG+ ++E+LR QQW ADCWMQLYDRWS VDDIGSLAVV ML
Sbjct: 606 LLTLEPNFMMFNWKIHGDHMVELLRPLAQQWSQADCWMQLYDRWSSVDDIGSLAVVHHML 665
Query: 301 TREPGNXXXXXXXXXXXXXXNCQKAAMRSLRFARNCSAHEHERLVYEGWILYDTGHRDEA 360
+PG NCQKAAMRSLR ARN S EHERLVYEGWILYDTGHR+EA
Sbjct: 666 ANDPGKSLLRFRQSLLLLRLNCQKAAMRSLRLARNHSKSEHERLVYEGWILYDTGHREEA 725
Query: 361 LAKAEQSIKIQRSFEAFFLKAYALGDSSLDTESSLSVVQLLEHANSCASDNLRKGQAYNN 420
LAKAE+SI IQRSFEAFFLKAYAL DS+LD +SS V+QLL+ A C SD LRKGQA NN
Sbjct: 726 LAKAEESISIQRSFEAFFLKAYALADSTLDPDSSNYVIQLLQEALKCPSDGLRKGQALNN 785
Query: 421 MGSIYVDCDLLDEAAECYNIALNIKHTRAHQGLARVHYLKNRKKAAYGEMSELIKVAKDS 480
+GS+YVDC+ LD AA+CY AL IKHTRAHQGLARV++LKN++KAAY EM++LI+ A+++
Sbjct: 786 LGSVYVDCEKLDLAADCYTNALTIKHTRAHQGLARVYHLKNQRKAAYDEMTKLIEKAQNN 845
Query: 481 ASAYEKRSEYGERDEARSDLNMATLLDPTRTYPYRYRAAVLMDESKEDEAIGELSQAIAF 540
ASAYEKRSEY +R+ A+SDL +AT LDP RTYPYRYRAAVLMD+ KE EAI ELS+AI+F
Sbjct: 846 ASAYEKRSEYCDREMAQSDLCLATQLDPLRTYPYRYRAAVLMDDHKESEAIDELSRAISF 905
Query: 541 RADLQLLHLRAAFFDSMGDNANTLRDCEAALCLDPTHGDTLELYRKA 587
+ DLQLLHLRAAF+DSMG+ A+ ++DCEAALC+DP H DTLELY KA
Sbjct: 906 KPDLQLLHLRAAFYDSMGEGASAIKDCEAALCIDPGHADTLELYHKA 952
>AT5G58550.1 | chr5:23665451-23668474 REVERSE LENGTH=926
Length = 925
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/592 (54%), Positives = 428/592 (72%), Gaps = 1/592 (0%)
Query: 1 EAAHLLVAACLQAFLRELPKSLSNPDVARLLCSPDGRERLDIAGN-ASFALYYFLSSVAM 59
E LL++ACLQ FLRELP+SL NP V R CS + +E+L G+ F LYYFLS V M
Sbjct: 323 ERTTLLLSACLQVFLRELPQSLHNPKVMRFFCSSEAKEQLAFLGSECVFLLYYFLSQVGM 382
Query: 60 EEDIRSNTTVMLLERLCESAERPWQKQLALHQFGCVMLERGEFKDAQGWFEDAIAEGHTY 119
EE + ++T ++LLER E A WQK L+LHQ GCV+ ER ++K AQ F A + GH Y
Sbjct: 383 EEKLTTDTMLILLERTREFARTNWQKALSLHQMGCVLFERKDYKAAQFHFRLASSLGHVY 442
Query: 120 SLAGVARSKFKRGHKYSAYKMMNSIMEDYEPAGWMYQERSLYCVGKEKMADLHIATELDP 179
SLAGV+R+++K+G +YSAY++MN ++ +++P GWMYQERSLY VG EK+ DL ATELDP
Sbjct: 443 SLAGVSRTEYKQGKRYSAYRLMNFLISNHKPHGWMYQERSLYNVGVEKLKDLATATELDP 502
Query: 180 TLTFPYKYRAVVFLEEDMVESAVAEISKVLGFKLVTDCLELRAWFYLALEEYEAAVRDIR 239
TL+FPYKYRAV+ E+ ++ A EI +++ FKL +CLELRAW YLA + E+ +RD+R
Sbjct: 503 TLSFPYKYRAVMKFEQKQIKEAFQEIDRLIQFKLSPECLELRAWLYLATGDRESCLRDLR 562
Query: 240 AILTLDPSYMMFHGKVHGEQLIEILRGYVQQWDMADCWMQLYDRWSEVDDIGSLAVVQQM 299
A+L+L+P+Y++F GK+ + + + ++ ADCW++L+DRWS VDD+ SLAVV QM
Sbjct: 563 AVLSLEPNYVVFGGKMRDDLVEALTAQCIEVESEADCWVRLFDRWSAVDDVASLAVVHQM 622
Query: 300 LTREPGNXXXXXXXXXXXXXXNCQKAAMRSLRFARNCSAHEHERLVYEGWILYDTGHRDE 359
L +P NCQ AAMR LR A N + E ERLVYEGW+LYD G+ +E
Sbjct: 623 LQNDPSKNFLRFRQSLLLLRLNCQGAAMRCLRMAWNLATSEAERLVYEGWLLYDMGYVEE 682
Query: 360 ALAKAEQSIKIQRSFEAFFLKAYALGDSSLDTESSLSVVQLLEHANSCASDNLRKGQAYN 419
L KAE++I IQRSFEAFFLKAYAL D +LD + VVQ+LE A C SD LRKGQA N
Sbjct: 683 TLTKAEEAISIQRSFEAFFLKAYALADKNLDADEISCVVQVLEEALKCPSDGLRKGQALN 742
Query: 420 NMGSIYVDCDLLDEAAECYNIALNIKHTRAHQGLARVHYLKNRKKAAYGEMSELIKVAKD 479
N+GSIY++ +LD+A Y A+ IKHTRA QGLARV++LKN++K A EM++LI+ +
Sbjct: 743 NLGSIYINLGMLDQAETAYKNAIEIKHTRARQGLARVYFLKNQRKEACEEMTKLIEKSCS 802
Query: 480 SASAYEKRSEYGERDEARSDLNMATLLDPTRTYPYRYRAAVLMDESKEDEAIGELSQAIA 539
A+AYEKRSEY ER++A+ DL+MAT LDP RTYPYRYRAAVLMD+ +E EA+ ELS+AIA
Sbjct: 803 KAAAYEKRSEYCEREKAKEDLDMATTLDPLRTYPYRYRAAVLMDDQRETEAVEELSKAIA 862
Query: 540 FRADLQLLHLRAAFFDSMGDNANTLRDCEAALCLDPTHGDTLELYRKASTKA 591
FR +LQ LHLRAAF ++ G+ + +DCEAALCLDP H +TL LY ++ +A
Sbjct: 863 FRPELQTLHLRAAFHEATGNLSLATQDCEAALCLDPNHTETLHLYSRSKDQA 914
>AT4G02680.1 | chr4:1181202-1184328 REVERSE LENGTH=889
Length = 888
Score = 606 bits (1562), Expect = e-173, Method: Compositional matrix adjust.
Identities = 322/594 (54%), Positives = 419/594 (70%), Gaps = 2/594 (0%)
Query: 1 EAAHLLVAACLQAFLRELPKSLSNPDVARLLCSPDGRERLDIAGNASFALYYFLSSVAME 60
E + +L ++CLQ FL E+P SL++ V +L + + +AG A F+LY LS V+M
Sbjct: 296 ENSPILASSCLQVFLYEMPDSLNDERVVEVLTRVNRSQVSTMAGKAPFSLYSCLSEVSMC 355
Query: 61 EDIRSNTTVMLLERLCESAERPWQKQLALHQFGCVMLERGEFKDAQGWFEDAIAEGHTYS 120
D RS+ T+ LE+L + AE Q+ L H+ GC+ L R E+++A+ FE A GH YS
Sbjct: 356 IDPRSDRTLGFLEKLVDFAENDRQQVLGFHRLGCMRLLRKEYREAEEAFETAFNLGHVYS 415
Query: 121 LAGVARSKFKRGHKYSAY-KMMNSIMEDYEPAGWMYQERSLYCVGKEKMADLHIATELDP 179
G+AR + +GH+ AY K+ + I P GWMYQERS YC G +K+ DL ATELDP
Sbjct: 416 ATGLARLGYIQGHRLWAYEKLSSVISSVSPPLGWMYQERSFYCEGDKKLEDLEKATELDP 475
Query: 180 TLTFPYKYRAVVFLEEDMVESAVAEISKVLGFKLVTDCLELRAWFYLALEEYEAAVRDIR 239
TLT+PY YRAV + + ++A+ EI+++LGFKL +CLE+R YL +++YEAA+RDI+
Sbjct: 476 TLTYPYMYRAVTRMSKQNAKAALEEINRILGFKLALECLEIRFCLYLGMDDYEAALRDIQ 535
Query: 240 AILTLDPSYMMFHGKVHGEQLIEILRGYVQQWDMADCWMQLYDRWSEVDDIGSLAVVQQM 299
A LTL P Y MF GKV G QL ++ +V+ W ADCWMQLY++WS VDDIGSL+V+ QM
Sbjct: 536 AALTLCPDYRMFDGKVAGRQLQTLVYEHVENWTTADCWMQLYEKWSNVDDIGSLSVIYQM 595
Query: 300 LTREPGNXXXXXXXXXXXXXXNCQKAAMRSLRFARNCSAHEHERLVYEGWILYDTGHRDE 359
L + NC +AAMRSL+ AR ++ +HERLVYEGWILYDTGH +E
Sbjct: 596 LESDACKGVLYFRQSLLLLRLNCPEAAMRSLQLAREHASSDHERLVYEGWILYDTGHCEE 655
Query: 360 ALAKAEQSIKIQRSFEAFFLKAYALGDSSLDTESSLSVVQLLEHANSCASDNLRKGQAYN 419
L KA++SI I+RSFEA+FL+AYAL +SSLD SS +VV LLE A C SD LRKGQA N
Sbjct: 656 GLQKAKESIGIKRSFEAYFLQAYALAESSLDPSSSSTVVSLLEDALKCPSDRLRKGQALN 715
Query: 420 NMGSIYVDCDLLDEAAECYNIALNIKHTRAHQGLARVHYLKNRKKAAYGEMSELIKVAKD 479
N+GS+YVDC+ LD AA+CY AL ++HTRAHQGLARVH+L+N K AAY EM+ LI+ A++
Sbjct: 716 NLGSVYVDCEKLDLAADCYINALKVRHTRAHQGLARVHFLRNDKAAAYEEMTRLIEKAQN 775
Query: 480 SASAYEKRSEYGERDEARSDLNMATLLDPTRTYPYRYRAAVLMDESKEDEAIGELSQAIA 539
+ASAYEKRSEY +R+ A+SDL M T LDP R YPYRYRAAVLMD KE EAI ELS+AIA
Sbjct: 776 NASAYEKRSEYCDRELAKSDLEMVTRLDPLRVYPYRYRAAVLMDSRKEREAITELSRAIA 835
Query: 540 FRADLQLLHLRAAFFDSMGDNANTLRDCEAALCLDPTHGDTLELYRKASTKAEP 593
F+ADL LLHLRAAF + +GD + LRDC AAL +DP H + LEL+ + ++ EP
Sbjct: 836 FKADLHLLHLRAAFHEHIGDVTSALRDCRAALSVDPNHQEMLELHSRVNSH-EP 888
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,828,850
Number of extensions: 451960
Number of successful extensions: 1208
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1197
Number of HSP's successfully gapped: 4
Length of query: 595
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 491
Effective length of database: 8,255,305
Effective search space: 4053354755
Effective search space used: 4053354755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)