Os03g0294600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Importin-beta1.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0294600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Importin-beta1.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.71 | 0.348 | 7.97 | 1.24 | 0.277 | -0.603 | -0.608 | 0.97 | 0.565 | 22.2 | 25.18 | 861 | -- | -- |
| 54.98 | 0.345 | 8 | 1.07 | 0.253 | -0.505 | -0.535 | -- | 0.517 | 22.1 | 25.18 | 853 | -- | -- |
| 56.01 | 0.349 | 7.97 | 1.2 | 0.277 | -0.574 | -- | 0.635 | 0.56 | 22.9 | 25.07 | 922 | -- | -- |
| 55.98 | 0.348 | 7.99 | 1.1 | 0.274 | -0.528 | -- | -- | 0.531 | 22.6 | 25.1 | 871 | -- | -- |
| 59.24 | 0.358 | 7.99 | 1.11 | -- | -0.416 | -- | 0.388 | 0.479 | -- | 27.99 | 926 | -- | -- |
| 61.1 | 0.366 | 8 | 0.937 | 0.122 | -- | -0.617 | -- | 0.485 | 22.6 | -- | -- | -- | -- |
| 62.48 | 0.37 | 8 | 0.959 | 0.136 | -- | -- | -- | 0.485 | 0.399 | -- | -- | -- | -- |
| 57.63 | 0.354 | 8 | 0.979 | -- | -0.431 | -- | -- | 0.415 | -- | 33.42 | 826 | -- | -- |
| 85.08 | 0.43 | 8.02 | -- | 0.183 | -0.267 | -- | -- | 0.392 | 22.4 | 25 | 521 | -- | -- |
| 63.63 | 0.373 | 8 | 0.964 | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
| 86.73 | 0.436 | 8.02 | -- | 0.15 | -- | -- | -- | 0.378 | 0.728 | -- | -- | -- | -- |
| 84.4 | 0.428 | 8.02 | -- | -- | -0.717 | -- | -- | 0.341 | -- | 34.38 | 287 | -- | -- |
| 88.14 | 0.438 | 8.02 | -- | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.26 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 2 | 51.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 8 | 51.45 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 13 | 16 |
| 9 | 51.50 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 30 | 51.96 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 37 | 52.07 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 92 | 52.64 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 23 |
| 110 | 52.77 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 111 | 52.77 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 114 | 52.79 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 115 | 52.79 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 117 | 52.81 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 19 |
| 135 | 52.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 143 | 52.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 159 | 53.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 19 |
| 163 | 53.16 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 175 | 53.28 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 19 |
| 182 | 53.30 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 19 |
| 188 | 53.35 | temperature | 20.0 | 90 | > th | dose dependent | sin | 16 | NA |
| 224 | 53.47 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 245 | 53.58 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 263 | 53.64 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 14 |
| 265 | 53.65 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 17 |
| 275 | 53.68 | wind | 7.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 307 | 53.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 316 | 53.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 16 |
| 320 | 53.83 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 323 | 53.84 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 8 |
| 339 | 53.88 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 360 | 53.93 | wind | 9.0 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 368 | 53.94 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 24 | 5 |
| 370 | 53.96 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 405 | 54.02 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 408 | 54.03 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 421 | 54.06 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 11 |
| 422 | 54.06 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 15 |
| 424 | 54.06 | humidity | 70.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 427 | 54.07 | radiation | 1.0 | 90 | < th | dose independent | rect. | 11 | 13 |
| 439 | 54.10 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 9 |
| 454 | 54.12 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 11 |
| 458 | 54.13 | temperature | 30.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 460 | 54.13 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 15 |
| 470 | 54.14 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 13 |
| 474 | 54.15 | radiation | 1.0 | 270 | < th | dose independent | sin | 22 | NA |
| 483 | 54.16 | humidity | 70.0 | 30 | > th | dose independent | rect. | 5 | 19 |
| 486 | 54.17 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 15 | 9 |
| 487 | 54.17 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 494 | 54.18 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 506 | 54.21 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 8 |
| 509 | 54.21 | radiation | 1.0 | 270 | < th | dose dependent | sin | 22 | NA |
| 519 | 54.23 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 3 |
| 545 | 54.27 | wind | 3.0 | 90 | < th | dose independent | rect. | 24 | 5 |
| 561 | 54.30 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 592 | 54.34 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 661 | 54.42 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 707 | 54.46 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 755 | 54.50 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 16 | 16 |
| 765 | 54.52 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 790 | 54.54 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 15 |
| 821 | 54.57 | radiation | 1.0 | 90 | < th | dose dependent | sin | 18 | NA |
| 822 | 54.57 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 856 | 54.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 862 | 54.61 | humidity | 70.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 896 | 54.64 | humidity | 70.0 | 10 | > th | dose independent | rect. | 14 | 10 |
| 911 | 54.65 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 10 |
| 941 | 54.68 | radiation | 1.0 | 90 | < th | dose independent | sin | 18 | NA |
| 953 | 54.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 14 |
| 960 | 54.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 968 | 54.70 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 10 |