Os03g0282800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0282800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.2 | 0.287 | 10.6 | -1.73 | 1.07 | 0.845 | -0.234 | -1.68 | -0.446 | 6.87 | 15.7 | 1171 | -- | -- |
| 39.83 | 0.294 | 10.6 | -1.37 | 1.13 | 0.814 | -0.248 | -- | -0.35 | 6.59 | 14.59 | 1920 | -- | -- |
| 37.33 | 0.285 | 10.6 | -1.73 | 1.07 | 0.851 | -- | -1.67 | -0.445 | 6.87 | 15.57 | 1181 | -- | -- |
| 39.98 | 0.294 | 10.6 | -1.38 | 1.13 | 0.824 | -- | -- | -0.351 | 6.61 | 14 | 1926 | -- | -- |
| 94.84 | 0.454 | 10.6 | -1.7 | -- | 0.9 | -- | -1.48 | -0.416 | -- | 15.52 | 1342 | -- | -- |
| 51.25 | 0.336 | 10.5 | -1.1 | 1.08 | -- | -0.303 | -- | -0.197 | 6.48 | -- | -- | -- | -- |
| 51.48 | 0.336 | 10.5 | -1.11 | 1.08 | -- | -- | -- | -0.196 | 6.5 | -- | -- | -- | -- |
| 97.76 | 0.461 | 10.6 | -1.42 | -- | 0.823 | -- | -- | -0.344 | -- | 14.03 | 2816 | -- | -- |
| 80.89 | 0.419 | 10.5 | -- | 1.22 | 0.387 | -- | -- | -0.0769 | 6.48 | 26.6 | 459 | -- | -- |
| 111.71 | 0.494 | 10.5 | -1.08 | -- | -- | -- | -- | -0.173 | -- | -- | -- | -- | -- |
| 83.84 | 0.428 | 10.5 | -- | 1.06 | -- | -- | -- | -0.0722 | 6.56 | -- | -- | -- | -- |
| 128.46 | 0.528 | 10.5 | -- | -- | -0.57 | -- | -- | 0.139 | -- | 17.39 | 47520 | -- | -- |
| 142.55 | 0.557 | 10.5 | -- | -- | -- | -- | -- | -0.0533 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.77 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 3 | 36.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 5 | 36.11 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 6 | 36.11 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 9 | 36.31 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 14 | 36.72 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 15 | 36.73 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 17 | 36.76 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 18 | 36.78 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 19 | 36.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 20 | 36.80 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 28 | 36.87 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 31 | 36.88 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 38 | 36.92 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 14 | 14 |
| 81 | 37.01 | temperature | 15.0 | 1440 | > th | dose dependent | sin | 15 | NA |
| 91 | 37.03 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 102 | 37.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 104 | 37.06 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 141 | 37.11 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 189 | 37.17 | temperature | 20.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 191 | 37.17 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 200 | 37.19 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 237 | 37.21 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 20 |
| 260 | 37.23 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 719 | 37.62 | temperature | 15.0 | 1440 | > th | dose dependent | no | NA | NA |
| 910 | 37.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |