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Os03g0279600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0244) R2 : 0.932
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.25 (0.0732) R2dC : 0.418 R2C : 0.73
β3 : -2.6 (0.0861) R2dE : 0.198 R2E : 0.512
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.122 (0.0517) R2dN8 : 0.000906 R2N8 : 0.00478
σ : 0.458
deviance : 96.69
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C
peak time of C : 15.4
E
wheather : temperature
threshold : 5.565
memory length : 248
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.8
open length of G : 2.72

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.44 0.427 11.7 0.491 3.26 -2.61 -0.714 -2.23 -0.0671 15.4 8.943 254 2.92 2.48
87.01 0.434 11.7 0.623 3.26 -2.61 -0.178 -- -0.0256 15.3 7.737 247 2.9 2.57
83.35 0.425 11.7 0.488 3.25 -2.64 -- -1.74 -0.0511 15.4 8.822 249 2.87 2.62
86.43 0.433 11.7 0.657 3.24 -2.66 -- -- -0.0181 15.4 7.359 247 2.83 2.67
336.52 0.854 11.7 0.419 -- -3.84 -- -1.29 0.0871 -- -10.16 152 0.166 7.12
226.77 0.706 11.8 0.498 4.67 -- 0.485 -- -0.254 16.2 -- -- -- --
227.43 0.706 11.8 0.503 4.67 -- -- -- -0.252 16.2 -- -- -- --
330.29 0.846 11.7 0.653 -- -3.97 -- -- 0.192 -- -11.78 171 0.0167 7.05
96.69 0.458 11.7 -- 3.25 -2.6 -- -- -0.122 15.4 5.565 248 2.8 2.72
1407.47 1.75 11.8 0.316 -- -- -- -- -0.376 -- -- -- -- --
234.1 0.716 11.8 -- 4.66 -- -- -- -0.308 16.2 -- -- -- --
338.74 0.857 11.7 -- -- -4.04 -- -- 0.0602 -- -13.15 191 0.0167 6.99
1410.09 1.75 11.8 -- -- -- -- -- -0.411 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 86.77 temperature 10.0 270 > th dose dependent rect. 3 2
2 88.08 wind 5.0 270 < th dose independent rect. 3 2
3 88.76 precipitation 0.1 270 < th dose independent rect. 3 2
4 88.76 precipitation 0.1 270 < th dose dependent rect. 3 2
5 88.76 temperature 10.0 270 > th dose dependent rect. 2 4
7 89.71 wind 9.0 270 < th dose independent rect. 5 22
8 90.76 wind 9.0 270 < th dose dependent rect. 3 2
10 90.84 temperature 10.0 270 > th dose independent rect. 3 2
12 90.84 temperature 30.0 270 < th dose independent rect. 3 2
13 90.84 humidity 50.0 270 > th dose independent rect. 3 2
16 90.84 atmosphere 995.0 270 > th dose independent rect. 3 2
17 90.84 atmosphere 1010.0 270 < th dose independent rect. 3 2
19 90.84 radiation 20.0 270 < th dose independent rect. 3 2
22 90.84 temperature 10.0 270 > th dose independent rect. 5 22
23 90.84 radiation 30.0 270 < th dose dependent rect. 3 2
26 90.86 radiation 1.0 270 < th dose independent rect. 3 2
31 92.90 humidity 50.0 270 > th dose dependent rect. 3 2
33 93.00 wind 5.0 270 < th dose independent rect. 2 4
36 94.61 precipitation 0.1 270 < th dose independent rect. 2 4
37 94.61 precipitation 0.1 270 < th dose dependent rect. 2 4
38 94.98 wind 9.0 270 < th dose dependent rect. 2 4
41 95.43 wind 9.0 270 < th dose independent rect. 6 20
42 95.76 radiation 10.0 270 < th dose independent rect. 2 4
44 96.32 atmosphere 1010.0 270 < th dose independent rect. 2 4
47 96.44 radiation 20.0 270 < th dose dependent rect. 2 4
52 96.69 temperature 10.0 270 > th dose independent rect. 2 4
54 96.69 temperature 30.0 270 < th dose independent rect. 2 4
55 96.69 humidity 50.0 270 > th dose independent rect. 2 4
58 96.69 atmosphere 995.0 270 > th dose independent rect. 2 4
63 96.69 temperature 10.0 270 > th dose independent rect. 6 20
103 99.31 humidity 50.0 270 > th dose dependent rect. 2 4
104 99.66 precipitation 0.1 270 < th dose independent rect. 6 20
105 99.66 precipitation 0.1 270 < th dose dependent rect. 6 20
111 100.31 precipitation 0.1 270 < th dose independent rect. 5 22
112 100.31 precipitation 0.1 270 < th dose dependent rect. 5 22
203 105.43 wind 9.0 10 < th dose dependent rect. 4 4
222 106.79 wind 5.0 10 < th dose independent rect. 4 4
226 107.19 temperature 10.0 10 > th dose dependent rect. 3 5
253 108.58 wind 9.0 10 < th dose independent rect. 8 20
254 108.64 precipitation 0.1 10 < th dose independent rect. 4 4
255 108.64 precipitation 0.1 10 < th dose dependent rect. 4 4
258 108.72 radiation 40.0 10 < th dose independent rect. 4 4
277 108.94 temperature 10.0 10 > th dose independent rect. 4 4
279 108.94 temperature 30.0 10 < th dose independent rect. 4 4
280 108.94 humidity 50.0 10 > th dose independent rect. 4 4
282 108.94 atmosphere 995.0 10 > th dose independent rect. 4 4
283 108.94 atmosphere 1015.0 10 < th dose independent rect. 4 4
284 108.94 temperature 10.0 10 > th dose independent rect. 8 20
300 109.35 atmosphere 995.0 90 > th dose independent rect. 7 20
318 110.21 radiation 1.0 270 < th dose dependent rect. 2 15
379 112.10 precipitation 0.1 10 < th dose independent rect. 8 20
380 112.10 precipitation 0.1 10 < th dose dependent rect. 8 20
410 112.89 humidity 50.0 10 > th dose dependent rect. 4 4
418 113.30 atmosphere 1015.0 270 < th dose dependent rect. 3 2
434 113.85 temperature 15.0 270 > th dose independent rect. 11 10
437 113.92 wind 1.0 270 > th dose independent rect. 2 3
442 114.23 wind 1.0 270 > th dose independent rect. 3 1
456 114.76 atmosphere 995.0 270 > th dose dependent rect. 3 2
459 114.88 radiation 40.0 10 < th dose dependent rect. 4 4
482 115.01 atmosphere 995.0 10 > th dose independent rect. 8 20
562 117.26 temperature 15.0 270 > th dose independent rect. 11 19
592 118.07 temperature 15.0 270 > th dose independent rect. 13 17
596 118.24 temperature 15.0 270 > th dose independent rect. 10 21
597 118.25 atmosphere 995.0 90 > th dose dependent rect. 3 4
755 120.64 wind 9.0 270 < th dose independent rect. 21 14
763 120.79 atmosphere 1015.0 270 < th dose independent rect. 11 10
768 120.96 humidity 50.0 270 > th dose independent rect. 21 14
771 121.01 temperature 10.0 270 > th dose independent rect. 21 14
772 121.01 atmosphere 995.0 270 > th dose independent rect. 21 14
820 121.66 temperature 15.0 90 > th dose independent rect. 15 16
907 123.07 radiation 1.0 270 < th dose dependent sin 3 NA
918 123.27 humidity 50.0 90 > th dose independent rect. 7 20
933 123.64 atmosphere 995.0 10 > th dose dependent rect. 4 4
942 123.96 atmosphere 1015.0 90 < th dose independent rect. 7 20
979 124.65 wind 9.0 1440 < th dose independent rect. 4 5
980 124.65 temperature 10.0 1440 > th dose independent rect. 4 5
983 124.65 humidity 50.0 1440 > th dose independent rect. 4 5
985 124.65 atmosphere 995.0 1440 > th dose independent rect. 4 5
986 124.65 atmosphere 1015.0 1440 < th dose independent rect. 4 5
987 124.65 temperature 10.0 1440 > th dose independent rect. 9 19
990 124.66 radiation 40.0 90 < th dose independent rect. 13 18