Os03g0277500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0277500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 343.22 | 0.87 | 4.41 | 0.655 | 1.73 | -2.03 | 0.0883 | -0.156 | -0.0605 | 2.82 | 25.54 | 2691 | -- | -- |
| 343.17 | 0.863 | 4.41 | 0.688 | 1.73 | -2.05 | 0.115 | -- | -0.0662 | 2.8 | 25.7 | 2669 | -- | -- |
| 343.2 | 0.863 | 4.41 | 0.687 | 1.73 | -2.05 | -- | -0.0119 | -0.0647 | 2.81 | 25.69 | 2670 | -- | -- |
| 343.2 | 0.863 | 4.41 | 0.688 | 1.73 | -2.05 | -- | -- | -0.0666 | 2.81 | 25.7 | 2674 | -- | -- |
| 470.7 | 1.01 | 4.38 | 0.668 | -- | -1.88 | -- | -0.278 | 0.066 | -- | 26.1 | 6234 | -- | -- |
| 509.71 | 1.06 | 4.43 | -0.00551 | 1.46 | -- | -0.399 | -- | -0.195 | 3.19 | -- | -- | -- | -- |
| 510.22 | 1.06 | 4.43 | 0.00261 | 1.46 | -- | -- | -- | -0.192 | 3.17 | -- | -- | -- | -- |
| 470.16 | 1.01 | 4.37 | 0.791 | -- | -1.96 | -- | -- | 0.118 | -- | 26.1 | 6247 | -- | -- |
| 354.74 | 0.877 | 4.43 | -- | 1.73 | -1.91 | -- | -- | -0.154 | 2.83 | 25.82 | 2656 | -- | -- |
| 631.29 | 1.17 | 4.43 | 0.0647 | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
| 510.22 | 1.06 | 4.43 | -- | 1.46 | -- | -- | -- | -0.193 | 3.17 | -- | -- | -- | -- |
| 484.4 | 1.03 | 4.4 | -- | -- | -1.8 | -- | -- | -0.0495 | -- | 27.1 | 6268 | -- | -- |
| 631.4 | 1.17 | 4.43 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 339.70 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 2 | 340.61 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 6 | 340.80 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 8 | 340.84 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 13 | 341.26 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 35 | 342.60 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 36 | 342.87 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 42 | 343.89 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 49 | 344.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 51 | 344.53 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 53 | 344.68 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 82 | 345.36 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 83 | 345.39 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 97 | 345.70 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 102 | 345.81 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 123 | 346.39 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 127 | 346.44 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 128 | 346.44 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 5 |
| 143 | 346.68 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 146 | 346.72 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 160 | 346.89 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 169 | 346.91 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 172 | 346.98 | radiation | 1.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 190 | 347.16 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 204 | 347.29 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 209 | 347.35 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 224 | 347.50 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 225 | 347.50 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 20 |
| 232 | 347.55 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 10 |
| 256 | 347.68 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 260 | 347.70 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 265 | 347.71 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 277 | 347.76 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 278 | 347.76 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 337 | 347.80 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 349 | 347.82 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 401 | 347.95 | radiation | 1.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 402 | 347.95 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 418 | 347.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 499 | 348.18 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 500 | 348.18 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 510 | 348.26 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 18 |
| 519 | 348.37 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 12 | 22 |
| 528 | 348.41 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 540 | 348.49 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 542 | 348.49 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 548 | 348.50 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 19 |
| 561 | 348.51 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 562 | 348.51 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 565 | 348.51 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 580 | 348.51 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 606 | 348.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 698 | 349.07 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 710 | 349.22 | radiation | 1.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 775 | 349.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 817 | 349.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 17 |
| 818 | 349.73 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 16 |
| 825 | 349.74 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 828 | 349.75 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 10 |
| 892 | 349.90 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 906 | 349.94 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 972 | 350.20 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 978 | 350.21 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 18 |