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Os03g0275400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, DHHC-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.39 (0.0217) R2 : 0.512
β1 : -1.72 (0.0794) R2dD : 0.523 R2D : 0.445
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.317 (0.0463) R2dN8 : 0.0672 R2N8 : -0.0108
σ : 0.407
deviance : 75.93
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.43 0.317 9.41 -2.02 0.586 -0.347 -0.253 -2.56 -0.377 5.69 10 10 -- --
49.06 0.326 9.36 -1.69 0.565 -0.373 0.0718 -- -0.286 5.63 22.79 15 -- --
45.57 0.314 9.41 -2.01 0.59 -0.324 -- -2.45 -0.375 5.61 9.1 10 -- --
49 0.326 9.37 -1.67 0.549 -0.417 -- -- -0.285 5.84 22.97 14 -- --
59.59 0.36 9.41 -1.92 -- -0.822 -- -2.55 -0.304 -- 2.935 146 -- --
51.39 0.336 9.38 -1.75 0.672 -- 0.47 -- -0.332 4.94 -- -- -- --
51.86 0.337 9.38 -1.75 0.678 -- -- -- -0.334 5.16 -- -- -- --
59.69 0.36 9.37 -1.59 -- -0.776 -- -- -0.229 -- 23.66 166 -- --
116.53 0.503 9.31 -- 0.4 -0.962 -- -- 0.0018 7.26 20.63 65 -- --
75.93 0.407 9.39 -1.72 -- -- -- -- -0.317 -- -- -- -- --
132.47 0.538 9.34 -- 0.648 -- -- -- -0.14 5.25 -- -- -- --
122.5 0.515 9.31 -- -- -1.2 -- -- 0.0318 -- 18 216 -- --
154.4 0.58 9.34 -- -- -- -- -- -0.126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.95 temperature 10.0 270 > th dose dependent rect. 7 18
10 40.86 humidity 50.0 270 > th dose independent rect. 14 16
35 41.67 temperature 25.0 270 < th dose independent rect. 23 9
59 42.02 temperature 25.0 270 < th dose independent sin 9 NA
65 42.10 temperature 10.0 43200 > th dose independent rect. 9 6
66 42.12 humidity 50.0 270 > th dose independent rect. 1 18
75 42.22 temperature 10.0 43200 > th dose independent rect. 9 9
79 42.25 precipitation 0.1 270 < th dose independent rect. 8 17
82 42.25 precipitation 0.1 270 < th dose dependent rect. 8 17
102 42.49 temperature 10.0 270 > th dose dependent rect. 21 15
103 42.50 humidity 70.0 10 > th dose independent rect. 16 16
118 42.65 temperature 30.0 270 < th dose dependent rect. 24 7
122 42.70 temperature 15.0 10 > th dose dependent rect. 23 15
125 42.72 temperature 15.0 270 > th dose dependent rect. 6 8
138 42.78 radiation 40.0 270 < th dose dependent rect. 15 15
140 42.79 temperature 15.0 1440 > th dose independent rect. 9 6
141 42.79 temperature 15.0 10 > th dose dependent rect. 8 6
143 42.80 humidity 50.0 270 > th dose independent rect. 13 8
148 42.83 temperature 30.0 270 < th dose independent rect. 14 16
149 42.83 wind 1.0 270 > th dose independent rect. 6 19
155 42.86 radiation 40.0 270 < th dose dependent rect. 1 7
160 42.88 temperature 15.0 1440 > th dose independent rect. 9 9
168 42.91 radiation 20.0 270 < th dose independent rect. 15 15
176 42.96 wind 9.0 270 < th dose independent rect. 1 7
177 42.96 temperature 10.0 270 > th dose independent rect. 1 7
180 42.96 humidity 50.0 270 > th dose independent rect. 1 7
182 42.96 atmosphere 995.0 270 > th dose independent rect. 1 7
183 42.96 atmosphere 1015.0 270 < th dose independent rect. 1 7
187 42.96 temperature 10.0 270 > th dose independent rect. 8 17
196 42.98 radiation 40.0 270 < th dose independent rect. 1 7
197 42.98 precipitation 0.1 270 < th dose independent rect. 1 7
199 42.98 precipitation 0.1 270 < th dose dependent rect. 1 7
214 43.04 humidity 50.0 30 > th dose dependent rect. 16 16
218 43.06 temperature 15.0 270 > th dose independent rect. 16 14
236 43.09 temperature 15.0 90 > th dose dependent rect. 8 9
254 43.11 radiation 30.0 1440 < th dose dependent rect. 23 6
258 43.12 humidity 50.0 270 > th dose dependent rect. 14 16
271 43.15 humidity 50.0 270 > th dose independent rect. 24 21
286 43.20 radiation 1.0 270 < th dose dependent rect. 1 20
288 43.21 temperature 15.0 10 > th dose dependent rect. 8 8
294 43.23 wind 9.0 270 < th dose independent rect. 8 17
329 43.29 temperature 15.0 270 > th dose independent rect. 1 18
330 43.29 radiation 1.0 270 < th dose independent rect. 1 20
345 43.32 temperature 15.0 270 > th dose independent rect. 24 21
352 43.33 humidity 50.0 30 > th dose dependent rect. 14 18
370 43.35 temperature 20.0 270 > th dose independent rect. 6 8
371 43.35 wind 5.0 270 < th dose independent rect. 15 10
377 43.36 temperature 15.0 270 > th dose dependent rect. 8 3
436 43.46 atmosphere 995.0 270 > th dose independent rect. 8 17
439 43.46 wind 9.0 270 < th dose dependent rect. 15 10
445 43.47 temperature 15.0 1440 > th dose independent rect. 9 11
473 43.50 temperature 15.0 10 > th dose dependent rect. 8 10
485 43.52 wind 5.0 270 < th dose independent rect. 19 6
487 43.52 radiation 1.0 270 < th dose dependent sin 1 NA
505 43.57 humidity 60.0 10 > th dose independent rect. 14 18
513 43.58 temperature 20.0 10 > th dose dependent rect. 8 12
515 43.59 atmosphere 1005.0 90 > th dose independent rect. 22 5
527 43.61 temperature 15.0 270 > th dose independent rect. 21 16
528 43.61 atmosphere 995.0 90 > th dose dependent rect. 22 5
532 43.62 radiation 1.0 270 > th dose independent sin 2 NA
543 43.63 atmosphere 1015.0 270 < th dose dependent rect. 1 6
551 43.64 temperature 15.0 90 > th dose independent rect. 3 18
588 43.70 temperature 15.0 270 > th dose independent rect. 1 14
591 43.70 precipitation 0.1 270 < th dose independent rect. 5 22
594 43.70 precipitation 0.1 270 < th dose dependent rect. 5 22
612 43.74 temperature 25.0 270 > th dose dependent rect. 22 9
628 43.77 temperature 25.0 90 > th dose independent rect. 23 14
633 43.78 wind 9.0 270 < th dose independent rect. 16 14
646 43.79 temperature 25.0 10 > th dose independent rect. 8 6
657 43.80 precipitation 0.1 270 < th dose independent rect. 6 10
665 43.80 precipitation 0.1 270 < th dose dependent rect. 6 10
673 43.82 precipitation 0.1 270 < th dose independent rect. 19 6
674 43.82 temperature 10.0 270 > th dose independent rect. 6 10
675 43.82 atmosphere 1015.0 270 < th dose independent rect. 6 10
677 43.82 temperature 15.0 270 > th dose independent rect. 21 14
681 43.82 wind 9.0 270 < th dose independent rect. 1 18
684 43.82 precipitation 0.1 270 < th dose dependent rect. 19 6
692 43.83 temperature 25.0 270 < th dose independent rect. 24 19
700 43.84 temperature 15.0 270 > th dose dependent rect. 9 1
702 43.84 humidity 50.0 270 > th dose dependent rect. 1 7
724 43.87 radiation 30.0 30 < th dose independent rect. 11 16
730 43.88 precipitation 0.1 270 < th dose independent rect. 6 8
731 43.88 radiation 30.0 43200 < th dose independent rect. 17 11
732 43.88 wind 9.0 270 < th dose independent rect. 14 16
734 43.88 temperature 30.0 90 < th dose dependent rect. 3 6
737 43.88 precipitation 0.1 270 < th dose dependent rect. 6 8
744 43.89 wind 1.0 270 > th dose independent rect. 19 6
745 43.89 temperature 10.0 270 > th dose independent rect. 6 8
746 43.89 atmosphere 995.0 270 > th dose independent rect. 6 8
747 43.89 atmosphere 1015.0 270 < th dose independent rect. 6 8
762 43.91 precipitation 0.1 270 < th dose independent rect. 15 10
768 43.91 precipitation 0.1 270 < th dose dependent rect. 15 10
772 43.92 wind 9.0 1440 < th dose independent rect. 4 5
773 43.92 temperature 10.0 1440 > th dose independent rect. 4 5
776 43.92 humidity 50.0 1440 > th dose independent rect. 4 5
778 43.92 atmosphere 995.0 1440 > th dose independent rect. 4 5
779 43.92 atmosphere 1015.0 1440 < th dose independent rect. 4 5
783 43.92 temperature 10.0 1440 > th dose independent rect. 9 19
789 43.92 radiation 40.0 43200 < th dose dependent rect. 23 5
796 43.93 wind 1.0 270 > th dose independent rect. 6 8
820 43.95 wind 9.0 270 < th dose independent rect. 6 8
829 43.96 wind 1.0 90 > th dose independent rect. 22 5
848 43.98 wind 9.0 270 < th dose dependent rect. 19 6
854 43.99 temperature 10.0 1440 > th dose independent rect. 23 5
857 43.99 temperature 30.0 1440 < th dose independent rect. 23 5
861 43.99 humidity 50.0 1440 > th dose independent rect. 23 5
870 43.99 atmosphere 995.0 1440 > th dose independent rect. 23 5
871 43.99 radiation 1.0 1440 < th dose independent rect. 23 5
893 43.99 wind 9.0 270 < th dose independent rect. 6 10
901 43.99 temperature 10.0 1440 > th dose independent rect. 4 19
905 43.99 radiation 1.0 1440 < th dose dependent rect. 23 5
923 44.01 precipitation 0.1 1440 < th dose independent rect. 9 4
926 44.01 precipitation 0.1 1440 < th dose dependent rect. 9 4
933 44.01 temperature 15.0 90 > th dose dependent rect. 22 19
966 44.05 temperature 15.0 90 > th dose independent rect. 23 16
976 44.06 humidity 60.0 270 > th dose independent rect. 19 6
984 44.07 temperature 10.0 270 > th dose independent rect. 19 6
985 44.07 temperature 30.0 270 < th dose independent rect. 19 6
987 44.07 atmosphere 995.0 270 > th dose independent rect. 19 6
988 44.07 radiation 1.0 270 < th dose independent rect. 19 6
996 44.07 atmosphere 1015.0 270 < th dose independent rect. 1 18
998 44.07 radiation 1.0 270 < th dose dependent rect. 19 6