Os03g0275300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0275300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 506.42 | 1.06 | 7.18 | 0.429 | 8.76 | 2.92 | 1.09 | -1.85 | 1.15 | 19.9 | 69.13 | 30 | 23.7 | 17.8 |
| 516.36 | 1.06 | 7.17 | 0.495 | 8.72 | 2.9 | 1.68 | -- | 1.14 | 19.9 | 69.17 | 28 | 23.7 | 17.8 |
| 509.13 | 1.05 | 7.17 | 0.406 | 8.73 | 2.94 | -- | -2.21 | 1.16 | 19.9 | 69.44 | 27 | 23.8 | 17.8 |
| 525.11 | 1.07 | 7.16 | 0.41 | 8.71 | 2.89 | -- | -- | 1.18 | 19.9 | 68.99 | 25 | 23.8 | 17.9 |
| 1254.02 | 1.65 | 6.87 | 1.45 | -- | -6.17 | -- | 6.82 | 2.17 | -- | -62.06 | 435 | 22.6 | 13 |
| 702.54 | 1.24 | 7.2 | 0.417 | 7.35 | -- | 1.58 | -- | 0.874 | 20.8 | -- | -- | -- | -- |
| 710.9 | 1.25 | 7.2 | 0.365 | 7.34 | -- | -- | -- | 0.873 | 20.8 | -- | -- | -- | -- |
| 904.01 | 1.4 | 6.91 | 1.27 | -- | -6.16 | -- | -- | 1.5 | -- | -17.97 | 418 | 23.2 | 12.9 |
| 529.17 | 1.07 | 7.17 | -- | 8.73 | 2.92 | -- | -- | 1.13 | 19.8 | 69 | 26 | 23.8 | 17.8 |
| 3778.49 | 2.87 | 7 | 0.359 | -- | -- | -- | -- | 0.818 | -- | -- | -- | -- | -- |
| 714.41 | 1.25 | 7.2 | -- | 7.34 | -- | -- | -- | 0.833 | 20.8 | -- | -- | -- | -- |
| 699.98 | 1.23 | 6.97 | -- | -- | -7.53 | -- | -- | 0.963 | -- | -73.17 | 485 | 0.6 | 8.75 |
| 3781.88 | 2.87 | 7.01 | -- | -- | -- | -- | -- | 0.778 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 519.40 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 16 |
| 7 | 530.49 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 23 | 17 |
| 8 | 530.87 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 23 | 18 |
| 79 | 550.96 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 8 |
| 99 | 552.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 19 |
| 107 | 553.53 | humidity | 80.0 | 10 | < th | dose independent | rect. | 22 | 16 |
| 112 | 554.38 | humidity | 80.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 207 | 561.97 | humidity | 80.0 | 10 | < th | dose independent | rect. | 20 | 18 |
| 210 | 562.14 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 20 |
| 213 | 562.28 | humidity | 80.0 | 10 | > th | dose independent | sin | 3 | NA |
| 229 | 563.60 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 8 |
| 231 | 563.75 | humidity | 70.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 239 | 564.48 | humidity | 80.0 | 10 | < th | dose independent | sin | 4 | NA |
| 328 | 568.43 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 17 |
| 342 | 568.96 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 18 |
| 420 | 572.81 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 8 |
| 447 | 573.65 | humidity | 90.0 | 10 | < th | dose dependent | sin | 6 | NA |
| 471 | 574.38 | radiation | 1.0 | 30 | < th | dose independent | sin | 3 | NA |
| 497 | 575.67 | radiation | 1.0 | 30 | > th | dose independent | sin | 3 | NA |
| 503 | 575.79 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 15 |
| 566 | 578.52 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 592 | 579.29 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 6 |
| 628 | 580.06 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 20 |
| 687 | 581.78 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 688 | 581.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 712 | 582.56 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 15 |
| 731 | 583.21 | radiation | 20.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 735 | 583.23 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 5 | 8 |
| 741 | 583.40 | radiation | 40.0 | 30 | < th | dose independent | rect. | 12 | 17 |
| 743 | 583.40 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 11 |
| 746 | 583.51 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 758 | 583.98 | radiation | 1.0 | 270 | > th | dose independent | sin | 9 | NA |
| 778 | 584.53 | humidity | 80.0 | 270 | > th | dose independent | rect. | 11 | 3 |
| 785 | 584.78 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 8 |
| 788 | 584.89 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 794 | 585.16 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 11 | 3 |
| 818 | 585.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 9 |
| 819 | 585.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 857 | 586.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 19 |
| 859 | 586.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 879 | 587.20 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 8 |
| 880 | 587.20 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 8 |
| 887 | 587.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 17 |
| 888 | 587.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 17 |
| 925 | 587.91 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 928 | 588.00 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 16 |
| 962 | 588.59 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 994 | 589.24 | radiation | 1.0 | 270 | < th | dose independent | sin | 9 | NA |