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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0274400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.57 (0.0333) R2 : 0.428
β1 : -1.71 (0.135) R2dD : 0.259 R2D : -0.0982
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.49 (0.14) R2dE : 0.536 R2E : 0.138
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.483 (0.0749) R2dN8 : 0.0803 R2N8 : -0.0761
σ : 0.613
deviance : 173.5
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 57.2
memory length : 4361
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.72
open length of G : 0.483

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
162.47 0.599 5.56 -1.57 0.417 -2.49 0.0627 -0.626 -0.433 23.9 51.88 4337 2.66 0.287
162.8 0.594 5.57 -1.68 0.425 -2.42 0.0737 -- -0.446 23.8 51.71 4337 2.68 0.348
162.36 0.593 5.56 -1.56 0.422 -2.47 -- -0.614 -0.422 24 53.95 4337 2.66 0.307
162.78 0.594 5.58 -1.7 0.424 -2.45 -- -- -0.459 24 51.24 4337 2.68 0.339
173.41 0.613 5.55 -1.56 -- -2.5 -- -0.63 -0.439 -- 54.06 4337 2.67 0.417
283.54 0.789 5.48 -0.601 0.401 -- 0.239 -- -0.0152 23.9 -- -- -- --
283.78 0.789 5.48 -0.611 0.4 -- -- -- -0.0166 0.0747 -- -- -- --
173.5 0.613 5.57 -1.71 -- -2.49 -- -- -0.483 -- 57.2 4361 2.72 0.483
223.23 0.696 5.58 -- 0.453 -1.64 -- -- -0.19 23.8 53.2 4377 2.68 0.3
293.86 0.801 5.47 -0.598 -- -- -- -- -0.0109 -- -- -- -- --
293.61 0.802 5.46 -- 0.392 -- -- -- 0.0514 24 -- -- -- --
232.29 0.71 5.49 -- -- -1.61 -- -- -0.135 -- 54.52 4339 2.68 0.25
303.3 0.813 5.45 -- -- -- -- -- 0.0554 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 176.26 temperature 30 4320 < th dose dependent rect. 3 1
2 176.81 temperature 10 4320 > th dose dependent rect. 3 1
5 177.72 temperature 30 4320 < th dose dependent rect. 21 7
7 177.76 temperature 10 4320 > th dose dependent rect. 21 7
11 177.88 temperature 20 720 > th dose dependent sin 7 NA
12 177.90 temperature 10 720 > th dose dependent rect. 21 18
14 177.94 temperature 30 4320 < th dose dependent rect. 23 5
18 178.00 temperature 30 4320 < th dose dependent rect. 1 3
33 178.19 temperature 20 720 > th dose dependent rect. 21 16
38 178.25 temperature 10 4320 > th dose dependent rect. 1 3
80 178.58 temperature 10 720 > th dose dependent rect. 18 21
231 179.45 temperature 10 720 > th dose dependent rect. 23 16
260 179.62 temperature 10 4320 > th dose dependent sin 11 NA
274 179.70 temperature 30 4320 < th dose dependent sin 11 NA
546 181.51 temperature 10 720 > th dose dependent sin 7 NA
603 181.87 wind 9 43200 > th dose dependent rect. 20 10
751 182.79 wind 9 43200 < th dose independent rect. 19 6
760 182.84 temperature 10 720 > th dose dependent rect. 1 14
774 182.92 temperature 30 720 < th dose dependent rect. 20 17
798 183.02 wind 9 43200 > th dose dependent rect. 20 5
876 183.33 wind 9 43200 > th dose independent rect. 19 5
903 183.43 wind 9 43200 < th dose independent rect. 19 8
964 183.61 wind 9 43200 > th dose independent rect. 19 9