Os03g0274300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Initiator-binding protein.
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Os03g0274300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Initiator-binding protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.05 | 0.446 | 12.2 | -0.414 | 2.57 | -1.51 | 1.5 | 1.04 | 0.0344 | 2.82 | 15.05 | 37 | 12 | 6.38 |
| 90.24 | 0.442 | 12.2 | -0.418 | 2.51 | -1.54 | 1.17 | -- | 0.00756 | 2.83 | 14.51 | 35 | 11.9 | 6.5 |
| 94.55 | 0.453 | 12.2 | -0.503 | 2.48 | -1.58 | -- | -0.229 | -0.0493 | 2.85 | 16.09 | 49 | 11.9 | 6.3 |
| 94.26 | 0.452 | 12.2 | -0.469 | 2.44 | -1.66 | -- | -- | -0.00895 | 2.84 | 16.24 | 45 | 11.8 | 6.42 |
| 211.58 | 0.677 | 12.2 | -0.176 | -- | -3.13 | -- | 0.647 | 0.104 | -- | 1.552 | 58 | 11.4 | 7.08 |
| 135.29 | 0.545 | 12.2 | -0.561 | 3.28 | -- | 1.36 | -- | -0.0707 | 3.15 | -- | -- | -- | -- |
| 141.32 | 0.557 | 12.2 | -0.589 | 3.28 | -- | -- | -- | -0.0786 | 3.14 | -- | -- | -- | -- |
| 202.51 | 0.663 | 12.2 | -0.345 | -- | -3.31 | -- | -- | -0.0608 | -- | 1.812 | 66 | 11.3 | 6.98 |
| 99.67 | 0.465 | 12.2 | -- | 2.38 | -1.76 | -- | -- | 0.0292 | 2.87 | 17.07 | 44 | 11.8 | 6.45 |
| 755.93 | 1.28 | 12.2 | -0.449 | -- | -- | -- | -- | 0.00726 | -- | -- | -- | -- | -- |
| 150.47 | 0.574 | 12.2 | -- | 3.27 | -- | -- | -- | -0.013 | 3.14 | -- | -- | -- | -- |
| 119 | 0.508 | 12.2 | -- | -- | -3.51 | -- | -- | 0.0413 | -- | -39.22 | 456 | 6.43 | 9.67 |
| 761.26 | 1.29 | 12.2 | -- | -- | -- | -- | -- | 0.0571 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.83 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 7 | 94.20 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 7 |
| 19 | 94.43 | humidity | 90.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 21 | 94.97 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 26 | 96.24 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 11 | 4 |
| 29 | 96.83 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 10 | 6 |
| 33 | 97.04 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 19 |
| 40 | 97.92 | radiation | 1.0 | 30 | < th | dose dependent | sin | 16 | NA |
| 52 | 98.53 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 56 | 98.53 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 59 | 98.53 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 61 | 98.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 6 |
| 62 | 98.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 74 | 98.85 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 86 | 98.97 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 89 | 99.12 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 94 | 99.28 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 96 | 99.30 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 99 | 99.30 | temperature | 10.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 101 | 99.43 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 12 | 14 |
| 103 | 99.48 | wind | 9.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 108 | 99.80 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 114 | 99.98 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 18 | 18 |
| 115 | 99.98 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 18 | 18 |
| 125 | 100.28 | radiation | 1.0 | 30 | < th | dose independent | sin | 16 | NA |
| 151 | 100.78 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 171 | 101.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 21 |
| 178 | 101.65 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 19 |
| 180 | 101.73 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 19 |
| 189 | 101.87 | wind | 1.0 | 90 | > th | dose independent | rect. | 17 | 19 |
| 192 | 101.98 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 201 | 102.18 | radiation | 1.0 | 30 | > th | dose independent | sin | 16 | NA |
| 203 | 102.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 3 |
| 204 | 102.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 207 | 102.23 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 208 | 102.23 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 227 | 102.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 13 |
| 228 | 102.38 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 233 | 102.45 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 235 | 102.50 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 240 | 102.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 243 | 102.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 272 | 102.96 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 285 | 103.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 286 | 103.17 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 291 | 103.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 304 | 103.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 21 |
| 313 | 103.57 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 5 | 11 |
| 318 | 103.67 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 324 | 103.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 21 |
| 325 | 103.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 345 | 104.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 367 | 104.38 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 20 | 20 |
| 389 | 104.61 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 406 | 104.81 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 425 | 104.98 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 20 |
| 456 | 105.17 | radiation | 40.0 | 90 | < th | dose dependent | sin | 14 | NA |
| 465 | 105.30 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 466 | 105.33 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 513 | 105.61 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 524 | 105.77 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 16 | 8 |
| 527 | 105.78 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 602 | 106.43 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 721 | 106.97 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 789 | 107.44 | radiation | 1.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 798 | 107.50 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 15 |
| 811 | 107.54 | radiation | 1.0 | 30 | < th | dose independent | rect. | 16 | 9 |
| 830 | 107.56 | temperature | 25.0 | 90 | > th | dose dependent | sin | 21 | NA |
| 881 | 107.86 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 888 | 107.90 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 5 |
| 889 | 107.90 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 895 | 107.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 896 | 107.92 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 897 | 107.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 899 | 107.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 900 | 107.92 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 901 | 107.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 902 | 107.92 | temperature | 25.0 | 270 | > th | dose dependent | sin | 1 | NA |
| 919 | 108.00 | radiation | 40.0 | 90 | < th | dose independent | rect. | 18 | 18 |
| 922 | 108.01 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 924 | 108.02 | wind | 9.0 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 946 | 108.12 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 959 | 108.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 961 | 108.18 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 978 | 108.28 | radiation | 40.0 | 270 | < th | dose independent | rect. | 16 | 19 |
| 984 | 108.29 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 19 |