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Os03g0272900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : DVL family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0307) R2 : 0.649
β1 : 1.62 (0.112) R2dD : 0.167 R2D : 0.0229
β2 : 1.63 (0.0801) R2dC : 0.321 R2C : 0.279
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.07 (0.0655) R2dN8 : 0.276 R2N8 : 0.154
σ : 0.577
deviance : 151.92
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_____
C
peak time of C : 5.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
137.27 0.55 10.6 1.33 1.66 -1 0.192 0.0699 0.876 5.88 24.1 813 -- --
137.13 0.545 10.6 1.33 1.65 -1.04 0.218 -- 0.887 5.87 23.7 854 -- --
137.23 0.546 10.6 1.34 1.65 -1.04 -- -0.0126 0.883 5.88 23.71 852 -- --
137.23 0.546 10.6 1.34 1.65 -1.04 -- -- 0.883 5.88 23.7 851 -- --
272.87 0.769 10.6 1.27 -- -1.06 -- 0.419 0.851 -- 25.9 1204 -- --
151.81 0.578 10.5 1.62 1.63 -- 0.217 -- 1.07 5.6 -- -- -- --
151.92 0.577 10.5 1.62 1.63 -- -- -- 1.07 5.6 -- -- -- --
272.97 0.769 10.6 1.35 -- -1.09 -- -- 0.87 -- 25.7 1200 -- --
149.6 0.57 10.6 -- 1.62 -1.39 -- -- 0.541 5.65 22.8 47520 -- --
290.17 0.796 10.6 1.68 -- -- -- -- 1.11 -- -- -- -- --
221.4 0.696 10.6 -- 1.66 -- -- -- 0.891 5.56 -- -- -- --
286.49 0.788 10.7 -- -- -1.44 -- -- 0.55 -- 23.38 47520 -- --
364.29 0.891 10.6 -- -- -- -- -- 0.925 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 125.56 temperature 15.0 720 > th dose dependent rect. 3 2
13 129.19 temperature 10.0 270 > th dose dependent rect. 2 9
18 129.34 temperature 20.0 720 > th dose independent rect. 3 10
20 129.59 temperature 20.0 720 > th dose independent rect. 3 2
38 130.81 temperature 20.0 270 > th dose independent rect. 4 16
58 131.81 radiation 1.0 270 < th dose dependent rect. 17 3
61 131.89 temperature 25.0 720 < th dose dependent rect. 5 2
67 132.04 radiation 1.0 270 < th dose independent rect. 17 3
68 132.05 atmosphere 1010.0 270 < th dose independent rect. 3 8
79 132.34 radiation 1.0 90 < th dose independent rect. 17 6
83 132.42 temperature 20.0 10 > th dose dependent rect. 4 11
91 132.65 radiation 1.0 90 < th dose dependent rect. 17 6
92 132.66 temperature 30.0 10 < th dose dependent rect. 24 17
95 132.68 temperature 30.0 90 < th dose independent rect. 17 6
103 132.81 temperature 25.0 720 < th dose dependent rect. 2 14
114 133.03 atmosphere 1010.0 270 < th dose independent rect. 4 17
123 133.17 humidity 50.0 14400 > th dose independent rect. 19 4
127 133.18 temperature 15.0 720 > th dose dependent rect. 1 12
155 133.42 temperature 25.0 720 < th dose dependent sin 5 NA
167 133.56 temperature 15.0 1440 > th dose independent rect. 19 5
183 133.70 temperature 30.0 90 < th dose dependent rect. 23 18
185 133.71 temperature 10.0 270 > th dose dependent rect. 4 17
191 133.74 humidity 60.0 90 > th dose independent rect. 17 6
211 133.87 temperature 10.0 270 > th dose dependent rect. 3 19
233 134.02 temperature 30.0 270 < th dose independent rect. 17 3
242 134.10 temperature 20.0 720 < th dose independent rect. 3 11
255 134.18 temperature 20.0 720 > th dose independent sin 4 NA
276 134.33 humidity 60.0 270 > th dose independent rect. 17 3
290 134.39 humidity 50.0 270 > th dose dependent rect. 17 3
315 134.52 humidity 50.0 90 > th dose dependent rect. 17 6
335 134.63 temperature 15.0 720 > th dose dependent sin 7 NA
336 134.63 temperature 10.0 10 > th dose dependent rect. 4 20
340 134.67 temperature 20.0 720 < th dose independent rect. 3 8
361 134.75 radiation 1.0 90 < th dose dependent sin 20 NA
394 134.94 humidity 60.0 90 > th dose independent rect. 18 15
439 135.16 atmosphere 995.0 270 > th dose independent rect. 18 2
453 135.22 temperature 15.0 270 > th dose independent rect. 18 2
472 135.29 radiation 10.0 43200 < th dose dependent rect. 19 4
492 135.38 radiation 10.0 10 < th dose dependent rect. 22 20
493 135.39 humidity 60.0 90 > th dose independent rect. 18 17
506 135.42 atmosphere 1015.0 270 < th dose independent rect. 18 2
507 135.42 radiation 20.0 270 < th dose independent rect. 18 2
510 135.42 temperature 10.0 270 > th dose independent rect. 20 22
522 135.46 wind 9.0 270 < th dose independent rect. 18 2
524 135.47 temperature 30.0 90 < th dose independent rect. 18 15
525 135.47 precipitation 0.1 270 < th dose independent rect. 20 22
531 135.47 precipitation 0.1 270 < th dose dependent rect. 20 22
536 135.50 temperature 20.0 720 < th dose independent sin 3 NA
555 135.58 wind 1.0 270 > th dose independent rect. 18 2
566 135.63 temperature 15.0 90 > th dose independent rect. 18 5
582 135.67 precipitation 0.1 90 < th dose independent rect. 23 19
585 135.67 precipitation 0.1 90 < th dose dependent rect. 23 19
592 135.70 radiation 1.0 1440 < th dose dependent rect. 19 4
612 135.80 humidity 50.0 270 > th dose independent rect. 3 18
633 135.86 atmosphere 995.0 90 > th dose independent rect. 18 5
637 135.88 wind 9.0 90 < th dose independent rect. 18 5
641 135.88 radiation 20.0 90 < th dose independent rect. 18 5
644 135.88 temperature 10.0 90 > th dose independent rect. 23 19
670 135.96 temperature 25.0 10 > th dose independent rect. 5 10
675 135.98 radiation 20.0 270 < th dose independent rect. 16 5
701 136.04 temperature 30.0 1440 < th dose independent rect. 19 4
705 136.04 humidity 50.0 1440 > th dose independent rect. 19 4
707 136.04 atmosphere 995.0 1440 > th dose independent rect. 19 4
708 136.04 radiation 1.0 1440 < th dose independent rect. 19 4
729 136.04 temperature 10.0 1440 > th dose independent rect. 23 20
736 136.06 radiation 1.0 90 > th dose independent sin 19 NA
741 136.08 wind 9.0 270 < th dose independent rect. 20 22
745 136.10 radiation 1.0 90 < th dose independent sin 19 NA
776 136.19 wind 9.0 90 < th dose independent rect. 23 19
795 136.25 wind 9.0 270 < th dose dependent rect. 18 2
814 136.33 radiation 40.0 90 < th dose independent rect. 18 17
818 136.35 atmosphere 1015.0 90 < th dose independent rect. 23 19
836 136.42 precipitation 0.1 270 < th dose independent rect. 18 2
838 136.42 precipitation 0.1 270 < th dose dependent rect. 18 2
850 136.44 atmosphere 1015.0 90 < th dose independent rect. 18 5
856 136.46 wind 9.0 90 < th dose dependent rect. 18 5
860 136.46 temperature 30.0 10 < th dose dependent rect. 22 19
876 136.52 temperature 25.0 10 < th dose independent rect. 24 17
883 136.54 atmosphere 1010.0 720 < th dose independent rect. 3 2
927 136.57 humidity 50.0 270 > th dose independent rect. 4 16
977 136.66 atmosphere 995.0 270 > th dose independent rect. 16 5