Os03g0268100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0268100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.57 | 0.213 | 10.8 | 0.0343 | 0.321 | 0.449 | 0.606 | -0.627 | 0.103 | 2.42 | 29.27 | 1718 | -- | -- |
| 20.64 | 0.212 | 10.8 | -0.116 | 0.328 | 0.391 | 0.623 | -- | 0.0849 | 2.4 | 29 | 1732 | -- | -- |
| 21.82 | 0.218 | 10.8 | 0.0321 | 0.329 | 0.449 | -- | -0.68 | 0.0974 | 2.84 | 29.29 | 1738 | -- | -- |
| 21.88 | 0.218 | 10.8 | -0.132 | 0.333 | 0.389 | -- | -- | 0.0848 | 2.8 | 29.1 | 1739 | -- | -- |
| 27.85 | 0.246 | 10.8 | 0.189 | -- | 0.541 | -- | -1.34 | 0.136 | -- | 29.29 | 1756 | -- | -- |
| 26.12 | 0.24 | 10.8 | -0.227 | 0.351 | -- | 0.546 | -- | 0.0319 | 2.88 | -- | -- | -- | -- |
| 27.05 | 0.244 | 10.8 | -0.24 | 0.359 | -- | -- | -- | 0.0283 | 3.29 | -- | -- | -- | -- |
| 28.16 | 0.247 | 10.8 | -0.115 | -- | 0.409 | -- | -- | 0.0854 | -- | 29.1 | 1778 | -- | -- |
| 22.29 | 0.22 | 10.8 | -- | 0.33 | 0.39 | -- | -- | 0.0871 | 2.91 | 29 | 1714 | -- | -- |
| 34.34 | 0.274 | 10.8 | -0.225 | -- | -- | -- | -- | 0.0377 | -- | -- | -- | -- | -- |
| 28.57 | 0.25 | 10.8 | -- | 0.354 | -- | -- | -- | 0.055 | 3.29 | -- | -- | -- | -- |
| 28.46 | 0.248 | 10.8 | -- | -- | 0.433 | -- | -- | 0.0993 | -- | 29.02 | 1783 | -- | -- |
| 35.67 | 0.279 | 10.8 | -- | -- | -- | -- | -- | 0.0627 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.22 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 20.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 3 | 20.35 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 11 | 20.53 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 13 | 20.56 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 14 | 20.56 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 16 | 20.57 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 21 | 20.59 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 26 | 20.63 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 27 | 20.63 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 34 | 20.67 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 36 | 20.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 38 | 20.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 53 | 20.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 56 | 20.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 58 | 20.75 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 61 | 20.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 2 | 5 |
| 81 | 20.82 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 82 | 20.83 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 85 | 20.83 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 20 |
| 93 | 20.85 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 115 | 20.89 | temperature | 10.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 120 | 20.90 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 137 | 20.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 140 | 20.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 14 |
| 185 | 20.95 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 6 | 9 |
| 206 | 20.98 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 256 | 21.00 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 23 | 17 |
| 261 | 21.01 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 297 | 21.04 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 316 | 21.06 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 318 | 21.06 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 322 | 21.07 | temperature | 30.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 332 | 21.08 | wind | 3.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 342 | 21.09 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 343 | 21.09 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 372 | 21.10 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 376 | 21.10 | wind | 7.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 397 | 21.11 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 412 | 21.11 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 426 | 21.12 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 437 | 21.12 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 452 | 21.12 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 17 |
| 487 | 21.14 | temperature | 30.0 | 1440 | < th | dose independent | sin | 16 | NA |
| 542 | 21.15 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 543 | 21.15 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 544 | 21.15 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 21 |
| 545 | 21.15 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 561 | 21.17 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 563 | 21.17 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 651 | 21.19 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 680 | 21.19 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 700 | 21.19 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 20 |
| 712 | 21.19 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 736 | 21.20 | temperature | 30.0 | 1440 | > th | dose independent | sin | 16 | NA |
| 740 | 21.20 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 741 | 21.20 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 745 | 21.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 750 | 21.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 855 | 21.20 | wind | 9.0 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 889 | 21.20 | wind | 7.0 | 43200 | > th | dose dependent | no | NA | NA |
| 917 | 21.21 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 922 | 21.21 | wind | 7.0 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 923 | 21.21 | wind | 7.0 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 925 | 21.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 955 | 21.22 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 965 | 21.22 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 975 | 21.22 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 17 |
| 978 | 21.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 19 |