Os03g0265400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).
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Os03g0265400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 50S ribosomal protein L4, chloroplast precursor (R-protein L4).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.71 | 0.483 | 12.7 | 0.00473 | 1.77 | 1.04 | -0.0339 | 0.561 | -0.794 | 22.1 | 25.5 | 193 | -- | -- |
| 105.81 | 0.479 | 12.7 | -0.0596 | 1.76 | 1.1 | -0.0442 | -- | -0.809 | 22.1 | 25.5 | 198 | -- | -- |
| 105.71 | 0.479 | 12.7 | 0.017 | 1.78 | 1.04 | -- | 0.652 | -0.79 | 22.1 | 25.55 | 178 | -- | -- |
| 105.81 | 0.479 | 12.7 | -0.0589 | 1.77 | 1.1 | -- | -- | -0.81 | 22.1 | 25.5 | 194 | -- | -- |
| 226.62 | 0.701 | 12.6 | -0.0919 | -- | 1.79 | -- | 1.12 | -0.856 | -- | 24.54 | 711 | -- | -- |
| 125.5 | 0.525 | 12.7 | 0.116 | 1.86 | -- | -0.00257 | -- | -0.75 | 21.2 | -- | -- | -- | -- |
| 125.5 | 0.525 | 12.7 | 0.116 | 1.86 | -- | -- | -- | -0.75 | 21.2 | -- | -- | -- | -- |
| 224.29 | 0.698 | 12.7 | -0.284 | -- | 1.9 | -- | -- | -0.925 | -- | 24.5 | 705 | -- | -- |
| 105.9 | 0.479 | 12.7 | -- | 1.77 | 1.08 | -- | -- | -0.803 | 22.1 | 25.51 | 194 | -- | -- |
| 326.47 | 0.844 | 12.6 | 0.121 | -- | -- | -- | -- | -0.76 | -- | -- | -- | -- | -- |
| 125.86 | 0.525 | 12.7 | -- | 1.86 | -- | -- | -- | -0.763 | 21.2 | -- | -- | -- | -- |
| 226.29 | 0.701 | 12.7 | -- | -- | 1.85 | -- | -- | -0.899 | -- | 24.5 | 696 | -- | -- |
| 326.86 | 0.844 | 12.6 | -- | -- | -- | -- | -- | -0.774 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 7 | 96.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 17 |
| 19 | 96.85 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 21 | 96.91 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 26 | 96.99 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 32 | 97.08 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 59 | 97.49 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 75 | 97.64 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 125 | 97.91 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 137 | 97.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 19 |
| 140 | 97.98 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 143 | 97.99 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 153 | 98.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 187 | 98.15 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 208 | 98.23 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 228 | 98.29 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 7 |
| 237 | 98.31 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 250 | 98.32 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 2 |
| 308 | 98.44 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 373 | 98.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 461 | 98.82 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 470 | 98.83 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 520 | 98.91 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 531 | 98.93 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 560 | 99.00 | humidity | 90.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 592 | 99.05 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 668 | 99.16 | humidity | 90.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 673 | 99.17 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 723 | 99.23 | humidity | 90.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 835 | 99.38 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 867 | 99.41 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 874 | 99.42 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 928 | 99.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 944 | 99.50 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |