Os03g0262200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0262200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.78 | 0.363 | 9.51 | 0.745 | 0.864 | 0.958 | -0.206 | 0.501 | -0.0386 | 11.9 | 25.04 | 34 | -- | -- |
| 60.07 | 0.361 | 9.5 | 0.822 | 0.859 | 0.911 | -0.35 | -- | -0.0149 | 11.9 | 25.3 | 41 | -- | -- |
| 59.91 | 0.36 | 9.51 | 0.737 | 0.87 | 0.984 | -- | 0.617 | -0.031 | 11.9 | 25.14 | 41 | -- | -- |
| 60.61 | 0.363 | 9.51 | 0.807 | 0.864 | 0.915 | -- | -- | -0.0195 | 11.9 | 25.3 | 40 | -- | -- |
| 98.23 | 0.462 | 9.56 | 0.704 | -- | 1.05 | -- | 0.78 | -0.144 | -- | 21.05 | 326 | -- | -- |
| 72.43 | 0.399 | 9.55 | 0.607 | 0.698 | -- | -0.355 | -- | -0.204 | 11.4 | -- | -- | -- | -- |
| 72.98 | 0.4 | 9.55 | 0.593 | 0.7 | -- | -- | -- | -0.206 | 11.4 | -- | -- | -- | -- |
| 92.78 | 0.449 | 9.53 | 0.794 | -- | 0.826 | -- | -- | -0.0499 | -- | 29.7 | 852 | -- | -- |
| 76.33 | 0.409 | 9.54 | -- | 0.804 | 0.598 | -- | -- | -0.165 | 11.7 | 25.3 | 40 | -- | -- |
| 103.66 | 0.476 | 9.57 | 0.574 | -- | -- | -- | -- | -0.213 | -- | -- | -- | -- | -- |
| 82.23 | 0.424 | 9.56 | -- | 0.693 | -- | -- | -- | -0.272 | 11.4 | -- | -- | -- | -- |
| 107.89 | 0.484 | 9.56 | -- | -- | 0.491 | -- | -- | -0.194 | -- | 29.97 | 829 | -- | -- |
| 112.36 | 0.495 | 9.58 | -- | -- | -- | -- | -- | -0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 9 |
| 17 | 51.91 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 21 | 52.71 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 21 |
| 27 | 53.32 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 20 |
| 28 | 53.60 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 9 |
| 44 | 54.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 18 | 21 |
| 45 | 54.32 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 57 | 54.94 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 62 | 55.09 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 96 | 55.74 | wind | 7.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 100 | 55.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 18 |
| 110 | 56.04 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 120 | 56.24 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 19 | 20 |
| 132 | 56.38 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 139 | 56.47 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 155 | 56.74 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 175 | 56.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 182 | 56.93 | radiation | 10.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 183 | 56.94 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 18 | 10 |
| 184 | 56.94 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 18 | 10 |
| 185 | 56.96 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 18 | 10 |
| 196 | 57.02 | humidity | 50.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 200 | 57.02 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 14 |
| 201 | 57.02 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 205 | 57.04 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 226 | 57.20 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 231 | 57.26 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 247 | 57.35 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 261 | 57.47 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 271 | 57.55 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 310 | 57.82 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 18 | 10 |
| 318 | 57.92 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 14 |
| 375 | 58.30 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 376 | 58.30 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 385 | 58.37 | wind | 9.0 | 90 | < th | dose dependent | rect. | 18 | 10 |
| 397 | 58.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 398 | 58.43 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 403 | 58.47 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 14 |
| 404 | 58.47 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 14 |
| 409 | 58.51 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 458 | 58.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 460 | 58.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 476 | 58.89 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 19 | 10 |
| 480 | 58.90 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 483 | 58.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 4 |
| 497 | 58.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 615 | 59.43 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 662 | 59.54 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 14 |
| 695 | 59.63 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 704 | 59.67 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 712 | 59.68 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 713 | 59.69 | wind | 7.0 | 10 | < th | dose independent | rect. | 19 | 10 |
| 721 | 59.70 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 748 | 59.75 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 755 | 59.76 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 761 | 59.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 769 | 59.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 773 | 59.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 781 | 59.80 | temperature | 25.0 | 30 | < th | dose dependent | no | NA | NA |
| 794 | 59.82 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 795 | 59.82 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 804 | 59.84 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 805 | 59.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 811 | 59.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 812 | 59.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 813 | 59.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 815 | 59.87 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 823 | 59.89 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 827 | 59.90 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 843 | 59.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 22 |
| 845 | 59.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 22 |
| 851 | 59.96 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 18 | 21 |
| 866 | 60.01 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 19 | 20 |
| 867 | 60.01 | wind | 9.0 | 90 | < th | dose independent | rect. | 18 | 21 |
| 870 | 60.02 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 4 |
| 873 | 60.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 877 | 60.04 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 884 | 60.06 | wind | 1.0 | 90 | > th | dose dependent | rect. | 15 | 3 |
| 886 | 60.07 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 905 | 60.11 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 911 | 60.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 20 |
| 912 | 60.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 20 |
| 932 | 60.19 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 942 | 60.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 951 | 60.23 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 961 | 60.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 971 | 60.26 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 14 |
| 984 | 60.30 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 19 | 20 |
| 998 | 60.33 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 3 |