Os03g0261500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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Os03g0261500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.76 | 0.181 | 13.4 | -0.62 | 0.446 | 0.966 | 0.348 | -0.769 | -0.0954 | 6.09 | 10.01 | 93 | -- | -- |
| 15.19 | 0.181 | 13.4 | -0.515 | 0.448 | 0.969 | 0.465 | -- | -0.0678 | 5.94 | 8.835 | 83 | -- | -- |
| 15.03 | 0.181 | 13.4 | -0.637 | 0.446 | 0.961 | -- | -0.927 | -0.101 | 6.05 | 10.05 | 94 | -- | -- |
| 15.71 | 0.185 | 13.4 | -0.506 | 0.447 | 0.945 | -- | -- | -0.0661 | 6 | 9.198 | 85 | -- | -- |
| 22.69 | 0.222 | 13.4 | -0.554 | -- | 0.697 | -- | -0.875 | -0.0541 | -- | 9.513 | 2 | -- | -- |
| 24.34 | 0.231 | 13.4 | -0.319 | 0.315 | -- | 0.213 | -- | 0.067 | 8.37 | -- | -- | -- | -- |
| 24.48 | 0.232 | 13.4 | -0.312 | 0.315 | -- | -- | -- | 0.067 | 8.42 | -- | -- | -- | -- |
| 21.5 | 0.216 | 13.4 | -0.517 | -- | 0.7 | -- | -- | -0.0533 | -- | 9.211 | 1480 | -- | -- |
| 21.67 | 0.218 | 13.4 | -- | 0.362 | 0.712 | -- | -- | 0.0171 | 6.26 | 9.198 | 85 | -- | -- |
| 29.99 | 0.256 | 13.4 | -0.31 | -- | -- | -- | -- | 0.0702 | -- | -- | -- | -- | -- |
| 27.04 | 0.243 | 13.4 | -- | 0.313 | -- | -- | -- | 0.102 | 8.49 | -- | -- | -- | -- |
| 28.02 | 0.247 | 13.4 | -- | -- | 0.544 | -- | -- | 0.0428 | -- | 7.558 | 2 | -- | -- |
| 32.54 | 0.266 | 13.4 | -- | -- | -- | -- | -- | 0.105 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.52 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 5 | 14.64 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 6 | 14.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 8 | 14.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 11 | 14.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 13 | 14.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 17 | 14.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 21 |
| 21 | 14.76 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 26 | 14.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 31 | 14.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 34 | 14.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 48 | 14.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 49 | 14.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 17 |
| 57 | 14.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 19 |
| 83 | 14.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 84 | 14.84 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 86 | 14.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 13 |
| 134 | 14.85 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 228 | 14.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 332 | 14.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 334 | 14.89 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 384 | 14.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 385 | 14.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 390 | 14.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 9 |
| 451 | 14.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 18 |
| 481 | 14.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 20 |
| 490 | 14.95 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 495 | 14.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 568 | 14.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 569 | 14.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 577 | 14.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 9 |
| 758 | 15.00 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 862 | 15.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 987 | 15.04 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |