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Os03g0261100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phospholipase A2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0441) R2 : 0.741
β1 : -4.82 (0.162) R2dD : 0.532 R2D : 0.434
β2 : 0.184 (0.119) R2dC : 0.000829 R2C : -0.0342
β3 : 1.22 (0.0879) R2dE : 0.13 R2E : 0.102
β4 : 4.08 (0.522) R2dD*C : 0.0344 R2D*C : -0.0254
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.46 (0.095) R2dN8 : 0.191 R2N8 : -0.00167
σ : 0.821
deviance : 310.43
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C
peak time of C : 6.58
E
wheather : humidity
threshold : 90.64
memory length : 63
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 21.4
open length of G : 18.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
311.61 0.829 12.2 -4.83 0.263 1.24 3.67 0.707 -1.42 6.38 89.57 96 21 18.6
310.43 0.821 12.2 -4.82 0.184 1.22 4.08 -- -1.46 6.58 90.64 63 21.4 18.3
338.36 0.857 12.2 -4.78 0.349 1.19 -- 1.14 -1.36 9.61 89 119 21.2 18.1
342.77 0.862 12.2 -4.82 0.517 1.07 -- -- -1.42 10 89.52 113 21.2 18.2
346.67 0.867 12.2 -4.75 -- 1.22 -- 1.21 -1.39 -- 90 118 21.6 17.6
404.49 0.943 12.1 -5.06 1.15 -- 2.38 -- -1.28 9.83 -- -- -- --
423.27 0.963 12.1 -4.96 1.14 -- -- -- -1.27 10.6 -- -- -- --
353.54 0.876 12.2 -4.79 -- 1.26 -- -- -1.43 -- 89.18 109 21.7 17.7
946.45 1.43 12.2 -- 0.45 1.29 -- -- -1.03 10.7 90.67 45 21.1 19.5
503.48 1.05 12.2 -4.98 -- -- -- -- -1.27 -- -- -- -- --
1072.06 1.53 12 -- 1.18 -- -- -- -0.714 10.9 -- -- -- --
950.31 1.44 12.2 -- -- 1.35 -- -- -1.02 -- 89 47 21.4 19
1158.37 1.59 12 -- -- -- -- -- -0.72 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 313.79 humidity 90 90 < th dose independent rect. 21 19
6 316.62 humidity 80 270 > th dose dependent rect. 22 10
18 320.86 humidity 90 270 < th dose independent rect. 19 20
26 322.51 humidity 80 270 > th dose dependent sin 9 NA
63 326.11 radiation 1 14400 < th dose dependent rect. 20 6
64 326.23 atmosphere 995 14400 > th dose independent rect. 18 21
65 326.26 atmosphere 995 14400 > th dose independent sin 5 NA
67 326.33 atmosphere 995 14400 < th dose dependent sin 2 NA
68 326.35 atmosphere 995 14400 < th dose independent sin 4 NA
69 326.35 atmosphere 995 14400 < th dose dependent rect. 2 15
70 326.35 atmosphere 995 14400 < th dose dependent rect. 2 21
71 326.35 atmosphere 995 14400 < th dose dependent rect. 5 21
74 326.36 atmosphere 995 14400 < th dose dependent rect. 14 12
90 326.41 atmosphere 995 14400 < th dose independent rect. 18 22
99 326.47 atmosphere 995 14400 < th dose dependent sin 17 NA
101 326.49 atmosphere 995 14400 > th dose independent rect. 1 14
103 326.51 atmosphere 995 14400 < th dose independent rect. 21 19
146 326.70 temperature 20 270 > th dose independent rect. 14 16
153 326.76 atmosphere 995 14400 > th dose independent rect. 21 19
170 326.88 atmosphere 995 14400 > th dose independent rect. 23 16
263 327.30 atmosphere 995 14400 > th dose independent rect. 1 23
265 327.31 atmosphere 995 14400 > th dose independent rect. 14 19
274 327.35 atmosphere 995 14400 < th dose dependent no NA NA
320 327.37 atmosphere 995 14400 > th dose independent no NA NA
327 327.38 atmosphere 995 14400 > th dose independent rect. 8 23
348 327.44 atmosphere 995 14400 < th dose independent no NA NA
349 327.44 atmosphere 995 14400 < th dose independent rect. 14 16
391 327.46 atmosphere 995 14400 > th dose independent rect. 23 23
392 327.47 atmosphere 995 14400 > th dose independent rect. 4 23
393 327.47 atmosphere 995 14400 > th dose independent rect. 6 23
419 327.54 atmosphere 995 14400 > th dose independent sin 13 NA
435 327.56 atmosphere 995 14400 < th dose independent rect. 1 23
458 327.61 atmosphere 995 14400 < th dose independent sin 13 NA
590 328.01 radiation 1 14400 < th dose dependent rect. 22 4
611 328.07 humidity 90 720 > th dose dependent rect. 20 6
689 328.50 temperature 15 270 > th dose dependent rect. 14 16
713 328.72 humidity 70 10 > th dose dependent rect. 1 9
725 328.75 humidity 90 720 > th dose independent rect. 20 6
782 329.48 atmosphere 995 14400 > th dose independent rect. 18 6
829 329.99 atmosphere 1010 90 < th dose dependent rect. 1 6
831 330.01 humidity 80 270 > th dose independent rect. 23 9
889 330.74 atmosphere 995 14400 < th dose independent rect. 17 11
902 330.86 humidity 90 270 < th dose independent sin 6 NA
914 330.90 atmosphere 995 14400 < th dose independent rect. 18 5
919 330.93 atmosphere 995 14400 < th dose dependent rect. 18 4
920 330.93 atmosphere 995 14400 < th dose dependent rect. 17 6
926 331.03 humidity 80 90 > th dose dependent rect. 24 15
943 331.35 atmosphere 1010 10 < th dose dependent rect. 1 7
970 331.81 humidity 90 90 > th dose independent rect. 24 11
975 331.90 atmosphere 1000 14400 < th dose dependent rect. 19 1
983 331.96 atmosphere 1010 90 < th dose dependent rect. 24 9
988 331.99 temperature 20 10 > th dose independent rect. 16 16